RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 OR51T1Q8NGJ9 327 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 LGALS14Q8TCE9 139 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 PTX4Q96A99 478 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 MED30Q96HR3 178 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 GAFA1Q96PS6 74 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SELENOIQ9C0D9 397 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RBM38Q9H0Z9 239 aaKnown RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 DNTTIP1Q9H147 329 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 TLNRD1Q9H1K6 362 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 ATG5Q9H1Y0 275 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RNF167Q9H6Y7 350 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RAB9BQ9NP90 201 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 NLKQ9UBE8 527 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RABL2AQ9UBK7 228 aaPredicted RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 SLC25A10Q9UBX3 287 aaPredicted RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 OR14J1Q9UGF5 321 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SPATA2Q9UM82 520 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RABL2BQ9UNT1 228 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 ST3GAL6Q9Y274 331 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 PEX16Q9Y5Y5 336 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 A3GALT2U3KPV4 340 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 TNCP24821 2201 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 A0A075B6Q4 140 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 IGKV1-27A0A075B6S5 117 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 A0A0A6YYH2 397 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 A0A1W2PPH5 198 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 PSMB11A5LHX3 300 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 A6NHS1 94 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 A6NJ64 397 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 OR2AT4A6NND4 320 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 NUDT19A8MXV4 375 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 MCRIP1C9JLW8 97 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 DEGS1O15121 323 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 SLC25A17O43808 307 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 DEDDO75618 318 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 RHBDL1O75783 438 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 APOA1P02647 267 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 CLEC2LP0C7M8 214 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 MED14OSP0DP75 135 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 SLC2A2P11168 524 aaPredicted RBP4.77□□□□□ -1.65
VPS25-204ENST00000589577 BCL3P20749 454 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 GABRR1P24046 479 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 KCNJ3P48549 501 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 CAV3P56539 151 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 CLDN12P56749 244 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 RBM11P57052 281 aaKnown RBP4.77□□□□□ -1.65
VPS25-204ENST00000589577 ZP1P60852 638 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 PITPNAQ00169 270 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 SCN1BQ07699 218 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 C2orf76Q3KRA6 126 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 ZNF260Q3ZCT1 412 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 ABCA11PQ4W5N1 156 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 PAN3Q58A45 887 aaKnown RBP4.77□□□□□ -1.65
VPS25-204ENST00000589577 ATAD3CQ5T2N8 411 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 ELP2Q6IA86 826 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 ACP7Q6ZNF0 438 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 ZNF788Q6ZQV5 615 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 ZNF695Q8IW36 515 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 TMEM185AQ8NFB2 350 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 OR4D6Q8NGJ1 314 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 OR5M8Q8NGP6 311 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 OR10K1Q8NGX5 313 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 DYNC2LI1Q8TCX1 351 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 DIRAS2Q96HU8 199 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 CMTM3Q96MX0 182 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 NRIP2Q9BQI9 281 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 WDR13Q9H1Z4 485 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 PPIL3Q9H2H8 161 aaKnown RBP4.77□□□□□ -1.65
VPS25-204ENST00000589577 BANF2Q9H503 90 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 HMG20AQ9NP66 347 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 ABCB10Q9NRK6 738 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 C19orf12Q9NSK7 152 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 PLEKHJ1Q9NW61 149 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 RHBDL2Q9NX52 303 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 PTTG2Q9NZH5 202 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 KIAA1456Q9P272 454 aa4.77□□□□□ -1.65
VPS25-204ENST00000589577 DNAH11Q96DT5 4516 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 TMEM272A0A1B0GTI8 110 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 SHISA3A0PJX4 238 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 RFPL4AA6NLU0 287 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 SERPINE3A8MV23 424 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 TMEM14DPA8MWL7 114 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 RFPL4AL1F8VTS6 287 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 SIGLEC5O15389 551 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 PDCD6O75340 191 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 CA11O75493 328 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 HAND1O96004 215 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 GLAP06280 429 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 CD3GP09693 182 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 IGHV4-30-4P0DP06 118 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 SPNP16150 400 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 FUT3P21217 361 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 CD24P25063 80 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 BLVRBP30043 206 aaPredicted RBP4.76□□□□□ -1.65
VPS25-204ENST00000589577 TGFBR1P36897 503 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 INPP1P49441 399 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 LGALS4P56470 323 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 GNG2P59768 71 aa4.76□□□□□ -1.65
VPS25-204ENST00000589577 RPS27AP62979 156 aaKnown RBP4.76□□□□□ -1.65
VPS25-204ENST00000589577 ARFRP1Q13795 201 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms