RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 ZNF616Q08AN1 781 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 ABCA11PQ4W5N1 156 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 FAM131AQ6UXB0 335 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 DAZ4Q86SG3 579 aaKnown RBP4.71□□□□□ -1.66
VMP1-208ENST00000588617 AMN1Q8IY45 258 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 ZFP82Q8N141 532 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 GPR32P1Q8NGA4 272 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 OR1P1Q8NH06 330 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 MFSD8Q8NHS3 518 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 OPTNQ96CV9 577 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 DAZ1Q9NQZ3 744 aaKnown RBP4.71□□□□□ -1.66
VMP1-208ENST00000588617 INIPQ9NRY2 104 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 PCM1Q15154 2024 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 EFCAB5A4FU69 1503 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 FHAD1B1AJZ9 1412 aa4.71□□□□□ -1.66
VMP1-208ENST00000588617 THOC2Q8NI27 1593 aaKnown RBP4.7□□□□□ -1.66
VMP1-208ENST00000588617 IGHV3-43A0A0B4J1X8 118 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 F5H5P2 479 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 KCNK1O00180 336 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 RBBP9O75884 186 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 WISP3O95389 354 aaPredicted RBP4.7□□□□□ -1.66
VMP1-208ENST00000588617 TNNC2P02585 160 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 IFNA6P05013 189 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 OR4A8P0C604 315 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 HIST1H1EP10412 219 aaKnown RBP4.7□□□□□ -1.66
VMP1-208ENST00000588617 ORM2P19652 201 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 PSMB3P49720 205 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 TMEM176BQ3YBM2 270 aaPredicted RBP4.7□□□□□ -1.66
VMP1-208ENST00000588617 LRRC34Q8IZ02 419 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 TMEM75Q8N9X5 138 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 ZFP62Q8NB50 900 aaPredicted RBP4.7□□□□□ -1.66
VMP1-208ENST00000588617 TMEM161BQ8NDZ6 487 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 C16orf78Q8WTQ4 265 aa4.7□□□□□ -1.66
VMP1-208ENST00000588617 ZNF717Q9BY31 904 aaPredicted RBP4.7□□□□□ -1.66
VMP1-208ENST00000588617 CHD2O14647 1828 aaKnown RBP4.69□□□□□ -1.66
VMP1-208ENST00000588617 MAP3K1Q13233 1512 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 ARAP3Q8WWN8 1544 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 IFNA16P05015 189 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 IL3P08700 152 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 OR12D1P0DN82 309 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 PTHLHP12272 177 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 EVI2BP34910 448 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 PMELP40967 661 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 AESQ08117 197 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 PDK2Q15119 407 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 RSU1Q15404 277 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 HES3Q5TGS1 186 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 SYPL2Q5VXT5 272 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 EBLN2Q6P2I7 272 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 ZNF880Q6PDB4 577 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 SLC25A34Q6PIV7 304 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 Q6ZRU5 148 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 ATP5L2Q7Z4Y8 100 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 GID4Q8IVV7 300 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 YIPF7Q8N8F6 280 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 OR1M1Q8NGA1 313 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 OR7D2Q96RA2 312 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 C1orf50Q9BV19 199 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 EIF5A2Q9GZV4 153 aaKnown RBP4.69□□□□□ -1.66
VMP1-208ENST00000588617 GTSF1LQ9H1H1 148 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 XPNPEP1Q9NQW7 623 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 OPN4Q9UHM6 478 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 SLC22A13Q9Y226 551 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 PLXNB3Q9ULL4 1909 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 KIAA1671Q9BY89 1806 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 SNAPC4Q5SXM2 1469 aa4.69□□□□□ -1.66
VMP1-208ENST00000588617 MAGI1Q96QZ7 1491 aaPredicted RBP4.69□□□□□ -1.66
VMP1-208ENST00000588617 SCN1AP35498 2009 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 IGLL5B9A064 214 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 K7EQS6 105 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 LTAP01374 205 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 FBP1P09467 338 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 OR13C7P0DN81 318 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 CCR7P32248 378 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 SLCO1A2P46721 670 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 LSM6P62312 80 aaKnown RBP4.68□□□□□ -1.66
VMP1-208ENST00000588617 ENDOGQ14249 297 aaKnown RBP4.68□□□□□ -1.66
VMP1-208ENST00000588617 MMDQ15546 238 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 LCN8Q6JVE9 175 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 FER1L6-AS1Q8NA97 138 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 OR51H1Q8NH63 302 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 OR4A5Q8NH83 315 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 ACY3Q96HD9 319 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 TSSK6Q9BXA6 273 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 TXNIPQ9H3M7 391 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 ARHGAP35Q9NRY4 1499 aa4.68□□□□□ -1.66
VMP1-208ENST00000588617 ADAMTS12P58397 1594 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 FMN1Q68DA7 1419 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 IGKV2D-24A0A075B6R9 120 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 IGHV3-21A0A0B4J1V1 117 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 OR5H14A6NHG9 310 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 CYSRT1A8MQ03 144 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 LEUTXA8MZ59 168 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 TCRBP04435 133 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 OMPP47874 163 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 N4BP2L1Q5TBK1 243 aaPredicted RBP4.67□□□□□ -1.66
VMP1-208ENST00000588617 OR10K2Q6IF99 312 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 SPOPLQ6IQ16 392 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms