RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZNF552Q9H707 407 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-206ENST00000587730 POLDIP2Q9Y2S7 368 aa15.81■□□□□ 0.12
DDX39A-206ENST00000587730 ARID1AO14497 2285 aa15.81■□□□□ 0.12
DDX39A-206ENST00000587730 TNFSF12O43508 249 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 RAB11AP62491 216 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 FAM90A2PQ658T7 463 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 TUSC5Q8IXB3 177 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 ZNF525Q8N782 197 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 ZBTB34Q8NCN2 500 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 OR51H1Q8NH63 302 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 FAM210BQ96KR6 192 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 RTL8AQ9BWD3 113 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 RPRMQ9NS64 109 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 CACNG5Q9UF02 275 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 RFNGQ9Y644 331 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 TRBV24-1A0A075B6N3 115 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 PINLYPA6NC86 204 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 ZNF729A6NN14 1252 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-206ENST00000587730 ERVFRD-1P60508 538 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 FAM209BQ5JX69 171 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 ABHD17BQ5VST6 288 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 LILRB2Q8N423 598 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 HS3ST6Q96QI5 342 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 AGMATQ9BSE5 352 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 OR51I2Q9H344 312 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 TMEM9BQ9NQ34 198 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 IL36RNQ9UBH0 155 aa15.8■□□□□ 0.12
DDX39A-206ENST00000587730 PIEZO1Q92508 2521 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 TRAV20A0A0B4J274 112 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 A0A0G2JRQ6 117 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 CYB5BO43169 146 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 CXCL1P09341 107 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 ACP1P24666 158 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 TMEM267Q0VDI3 215 aaPredicted RBP15.79■□□□□ 0.12
DDX39A-206ENST00000587730 ATP6V1FQ16864 119 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 MCEMP1Q8IX19 187 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 ZNF295-AS1Q8N0V1 137 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 RDH5Q92781 318 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 DDA1Q9BW61 102 aa15.79■□□□□ 0.12
DDX39A-206ENST00000587730 HS3ST1O14792 307 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BKO60814 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 YIF1AO95070 293 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 PTBP3O95758 552 aaKnown RBP15.78■□□□□ 0.12
DDX39A-206ENST00000587730 MBP02144 154 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BJP06899 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BOP23527 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BBP33778 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BDP58876 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BCP62807 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 CLN3Q13286 438 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST2H2BEQ16778 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-206ENST00000587730 P4HA3Q7Z4N8 544 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BHQ93079 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BNQ99877 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 HIST1H2BMQ99879 126 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 MSMO1Q15800 293 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 SLC23A3Q6PIS1 610 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 ZNF497Q6ZNH5 498 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 C20orf204Q6ZNR8 217 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 RCC1LQ96I51 464 aaKnown RBP15.78■□□□□ 0.12
DDX39A-206ENST00000587730 THOC3Q96J01 351 aaKnown RBP15.78■□□□□ 0.12
DDX39A-206ENST00000587730 PFDN5Q99471 154 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 WDR61Q9GZS3 305 aaKnown RBP15.78■□□□□ 0.12
DDX39A-206ENST00000587730 SDF2L1Q9HCN8 221 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 CRIM1Q9NZV1 1036 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 TINAGQ9UJW2 476 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 LOXL2Q9Y4K0 774 aa15.78■□□□□ 0.12
DDX39A-206ENST00000587730 NGFP01138 241 aa15.77■□□□□ 0.11
DDX39A-206ENST00000587730 TDGF1P13385 188 aa15.77■□□□□ 0.11
DDX39A-206ENST00000587730 SRYQ05066 204 aa15.77■□□□□ 0.11
DDX39A-206ENST00000587730 Q6P435 159 aa15.77■□□□□ 0.11
DDX39A-206ENST00000587730 CENPVQ7Z7K6 275 aaPredicted RBP15.77■□□□□ 0.11
DDX39A-206ENST00000587730 CA5BP1Q8WTZ4 195 aa15.77■□□□□ 0.11
DDX39A-206ENST00000587730 GPHA2Q96T91 129 aa15.77■□□□□ 0.11
DDX39A-206ENST00000587730 GP6Q9HCN6 339 aa15.77■□□□□ 0.11
DDX39A-206ENST00000587730 RBM7Q9Y580 266 aaKnown RBP15.77■□□□□ 0.11
DDX39A-206ENST00000587730 RTTNQ86VV8 2226 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 TGIF2-C20orf24A0A0A6YYL0 155 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 ZFP92A6NM28 416 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 H3BP45 60 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 NEURL1O76050 574 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 NXPH3O95157 252 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 CCL2P13500 99 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 MRPL49Q13405 166 aaKnown RBP15.76■□□□□ 0.11
DDX39A-206ENST00000587730 TESK1Q15569 626 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 C9orf135Q5VTT2 229 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF343Q6P1L6 599 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 FIP1L1Q6UN15 594 aaKnown RBP15.76■□□□□ 0.11
DDX39A-206ENST00000587730 TCTEX1D1Q8N7M0 179 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 IL1F10Q8WWZ1 152 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 GPR87Q9BY21 358 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 MBNL3Q9NUK0 354 aaKnown RBP15.76■□□□□ 0.11
DDX39A-206ENST00000587730 OR14J1Q9UGF5 321 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 NAT8Q9UHE5 227 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 WIPI2Q9Y4P8 454 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 URGCP-MRPS24S4R325 110 aa15.76■□□□□ 0.11
DDX39A-206ENST00000587730 MAP1LC3B2A6NCE7 125 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 TMEM250H0YL14 139 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 IGKV1-39P01597 117 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms