RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 HBZP02008 142 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 SLC2A2P11168 524 aaPredicted RBP11.21□□□□□ -0.61
SDF2-202ENST00000585428 RCC1P18754 421 aaPredicted RBP11.21□□□□□ -0.61
SDF2-202ENST00000585428 GPR176Q14439 515 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 SLC22A6Q4U2R8 563 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 ODF3L1Q8IXM7 274 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 CBR4Q8N4T8 237 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 OR4K15Q8NH41 348 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 OR1L1Q8NH94 360 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 MRPS24Q96EL2 167 aaKnown RBP11.21□□□□□ -0.61
SDF2-202ENST00000585428 OR51J1Q9H342 316 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 SPACA1Q9HBV2 294 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 RAB9BQ9NP90 201 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 FGF20Q9NP95 211 aaPredicted RBP11.21□□□□□ -0.61
SDF2-202ENST00000585428 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 CHCHD3Q9NX63 227 aaKnown RBP11.21□□□□□ -0.61
SDF2-202ENST00000585428 GNG12Q9UBI6 72 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 RYR2Q92736 4967 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 OVOL1O14753 267 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 ATP6V0E1O15342 81 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 SC5DO75845 299 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 LY86O95711 162 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 HLA-DRB1P01911 266 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 ETV1P50549 477 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 ACTBP60709 375 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 PPP3R1P63098 170 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 ADARB1P78563 741 aaKnown RBP11.2□□□□□ -0.62
SDF2-202ENST00000585428 MMDQ15546 238 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 FAM27D1Q5T7N8 215 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 NPBQ8NG41 125 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 OR10V1Q8NGI7 309 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 NEK7Q8TDX7 302 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 APH1BQ8WW43 257 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 DLX4Q92988 240 aaPredicted RBP11.2□□□□□ -0.62
SDF2-202ENST00000585428 OR5B12Q96R08 314 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 ZNF184Q99676 751 aaPredicted RBP11.2□□□□□ -0.62
SDF2-202ENST00000585428 ANKRD60Q9BZ19 345 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 MBNL3Q9NUK0 354 aaKnown RBP11.2□□□□□ -0.62
SDF2-202ENST00000585428 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
SDF2-202ENST00000585428 TRAV41A0A0B4J266 112 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 TRBV5-5A0A0J9YX44 114 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 LOC100130705A0A1B0GUX0 176 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 MAGEA13PA6NCF6 341 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 CA11O75493 328 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 GLAP06280 429 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 FRMD6-AS1P0C7T7 363 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 SPNP16150 400 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 MYF6P23409 242 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 CNTFRP26992 372 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 RIPK1Q13546 671 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 C19orf54Q5BKX5 351 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 OR2G6Q5TZ20 316 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 LIN54Q6MZP7 749 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 OVCH2Q7RTZ1 564 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 C5orf24Q7Z6I8 188 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 SLC29A1Q99808 456 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 NABP2Q9BQ15 211 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 TAF9BQ9HBM6 251 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 OR2S2Q9NQN1 319 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 ETAA1Q9NY74 926 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 PEX16Q9Y5Y5 336 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 DNAH7Q8WXX0 4024 aa11.19□□□□□ -0.62
SDF2-202ENST00000585428 TRAV8-7A0A075B6U6 113 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 CIB2O75838 187 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 LYL1P12980 280 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 DCKP27707 260 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 RPS11P62280 158 aaKnown RBP eCLIP11.18□□□□□ -0.62
SDF2-202ENST00000585428 SMN1Q16637 294 aaKnown RBP11.18□□□□□ -0.62
SDF2-202ENST00000585428 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 LY6G6FQ5SQ64 297 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 SIGIRRQ6IA17 410 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 TRAT1Q6PIZ9 186 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 LYPD6Q86Y78 171 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 OR52L2PQ8NGH6 319 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 GHSRQ92847 366 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 SMIM19Q96E16 107 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 ZNF251Q9BRH9 671 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 TOLLIPQ9H0E2 274 aa11.18□□□□□ -0.62
SDF2-202ENST00000585428 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
SDF2-202ENST00000585428 HUWE1Q7Z6Z7 4374 aaKnown RBP11.18□□□□□ -0.62
SDF2-202ENST00000585428 FAM90A7PA6NKC0 464 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 FAM90A23PA8MXZ1 464 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 NBR2O15453 112 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 SOX15O60248 233 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 YPEL1O60688 119 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 WBP4O75554 376 aaKnown RBP11.17□□□□□ -0.62
SDF2-202ENST00000585428 NDUFA3O95167 84 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 LALBAP00709 142 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 EGR2P11161 476 aaPredicted RBP11.17□□□□□ -0.62
SDF2-202ENST00000585428 GP9P14770 177 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 FUT3P21217 361 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
SDF2-202ENST00000585428 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
SDF2-202ENST00000585428 HTD2P86397 168 aa11.17□□□□□ -0.62
SDF2-202ENST00000585428 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms