RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CLEC9AQ6UXN8 241 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 C1orf229Q6ZS94 237 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-203ENST00000580986 C9orf139Q6ZV77 190 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 LINC00311Q8N616 119 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 BEND2Q8NDZ0 799 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 OR52I2Q8NH67 350 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 SNAPC3Q92966 411 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 YPEL2Q96QA6 119 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 SRRQ9GZT4 340 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 GHITMQ9H3K2 345 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 GFOD1Q9NXC2 390 aa8.5□□□□□ -1.05
CCDC47-203ENST00000580986 TRBV6-7A0A0A0MS04 114 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 IGHV2-26A0A0B4J1V2 119 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 SDCBPO00560 298 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-203ENST00000580986 MMP23AO75900 390 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 IGLV1-47P01700 117 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 SCTP09683 121 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 PTHLHP12272 177 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 CD40LGP29965 261 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 HERPUD1Q15011 391 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 MIDNQ504T8 468 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 PRAMEF5Q5TYX0 476 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 HCP5Q6MZN7 132 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 MFSD4AQ8N468 514 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 GVQW1Q8N7I0 195 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 OR5AP2Q8NGF4 316 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 OR9G1Q8NH87 305 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 OR1L1Q8NH94 360 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 NANPQ8TBE9 248 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 SETD6Q8TBK2 473 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 EDARADDQ8WWZ3 215 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 GCDHQ92947 438 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-203ENST00000580986 TRIM63Q969Q1 353 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 CREB3L1Q96BA8 519 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 PCGF1Q9BSM1 259 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 CCDC32Q9BV29 185 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 ST6GALNAC5Q9BVH7 336 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 CLEC7AQ9BXN2 247 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 WDR12Q9GZL7 423 aaKnown RBP8.49□□□□□ -1.05
CCDC47-203ENST00000580986 OR2S2Q9NQN1 319 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 ZNF230Q9UIE0 474 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-203ENST00000580986 CDC42EP3Q9UKI2 254 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 CSPG4Q6UVK1 2322 aa8.49□□□□□ -1.05
CCDC47-203ENST00000580986 F8P00451 2351 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 IGKV1D-8A0A087WSZ0 117 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 TRAV39A0A0B4J263 110 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 IGKV1-6A0A0C4DH72 117 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 CENPVL3A0A0U1RRI6 287 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 RNASEK-C17orf49H0YIS7 233 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 CD74P04233 296 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 CSF1P09603 554 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 GSTT2P0CG29 244 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 GSTT2BP0CG30 244 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 OMGP23515 440 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 GDNFP39905 211 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 RAB7AP51149 207 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 ZNF137PP52743 207 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 PPP5CP53041 499 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 AP3S2P59780 193 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 ARPC4P59998 168 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 DGCR2P98153 550 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 SCGB2A2Q13296 93 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 MORN2Q502X0 79 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 VAX1Q5SQQ9 334 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 MINOS1Q5TGZ0 78 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 GPR157Q5UAW9 335 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 SLC25A48Q6ZT89 311 aaKnown RBP8.48□□□□□ -1.05
CCDC47-203ENST00000580986 OVCH2Q7RTZ1 564 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 ABHD12Q8N2K0 398 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 Q8N402 240 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 DTX3Q8N9I9 347 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 TMEM229BQ8NBD8 167 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 ZNF439Q8NDP4 499 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 OR10J5Q8NHC4 309 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 RFESDQ8TAC1 157 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 SIRT7Q9NRC8 400 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 NECAP2Q9NVZ3 263 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 GNG12Q9UBI6 72 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 KLK11Q9UBX7 282 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 SLC23A1Q9UHI7 598 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 TBL2Q9Y4P3 447 aaKnown RBP8.48□□□□□ -1.05
CCDC47-203ENST00000580986 MINOS1-NBL1R4GNA1 71 aa8.48□□□□□ -1.05
CCDC47-203ENST00000580986 SVEP1Q4LDE5 3571 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 TRAV40A0A0B4J280 105 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 IGHV1-69DA0A0B4J2H0 117 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 ANKRD20A5PA0PJZ0 165 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 MEX3AA1L020 520 aaKnown RBP8.47□□□□□ -1.05
CCDC47-203ENST00000580986 ZNF736B4DX44 427 aaPredicted RBP8.47□□□□□ -1.05
CCDC47-203ENST00000580986 J3QR06 171 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 TUSC2O75896 110 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 IGHV1-69P01742 117 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 PRRX1P54821 245 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 TAS2R19P59542 299 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 LSAMPQ13449 338 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 DYRK1AQ13627 763 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 CDK10Q15131 360 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 HLA-DRB5Q30154 266 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 CHRFAM7AQ494W8 412 aa8.47□□□□□ -1.05
CCDC47-203ENST00000580986 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms