RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 LYG1Q8N1E2 194 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 SLC25A45Q8N413 288 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 KDF1Q8NAX2 398 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 BOD1Q96IK1 185 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 FAM117AQ9C073 453 aa11.75□□□□□ -0.53
TRAPPC8-207ENST00000580104 CISD2Q8N5K1 135 aaKnown RBP11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 SGMS2Q8NHU3 365 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 MANBALQ9NQG1 85 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 DMRT1Q9Y5R6 373 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 CNOT1A5YKK6 2376 aaKnown RBP11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 M0R1B8 84 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 MAGEA5P43359 124 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 MEF2BQ02080 365 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 RNF144BQ7Z419 303 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR4C12Q96R67 309 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 VPS25Q9BRG1 176 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 NUDT16L1Q9BRJ7 211 aaKnown RBP11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 CFHR5Q9BXR6 569 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 PCED1AQ9H1Q7 454 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 F8VVB4 439 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 F8VWA3 439 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 TMEM11P17152 192 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 GNB1P62873 340 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 ATP6V1FQ16864 119 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 VN1R17PQ8TDU5 208 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 ANAPC16Q96DE5 110 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 NCOR1O75376 2440 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 TCF20Q9UGU0 1960 aaKnown RBP11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 A0A0A6YYD4 124 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 CTXND1A0A1B0GTU2 59 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 C3orf80F5H4A9 247 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 CHEK1O14757 476 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 AESQ08117 197 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
TRAPPC8-207ENST00000580104 IGKV1D-8A0A087WSZ0 117 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CAMPP49913 170 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 RPS23P62266 143 aaKnown RBP11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 SLC24A4Q8NFF2 622 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 R3HDM4Q96D70 268 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 TBX15Q96SF7 602 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 ZNF835Q9Y2P0 537 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CBY1Q9Y3M2 126 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 PLXND1Q9Y4D7 1925 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 TRGV5A0A0B4J1U4 118 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 IGKV1-9A0A0C4DH69 117 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 IER3P46695 156 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 RANP62826 216 aaKnown RBP11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 SLC35B1P78383 322 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 RNASEKQ6P5S7 137 aaKnown RBP11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 ZNF837Q96EG3 531 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 RBKSQ9H477 322 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 RPRMQ9NS64 109 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 TOX3O15405 576 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 ZNF253O75346 499 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CT45A6P0DMU7 189 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CT45A5P0DMU8 189 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CT45A7P0DMV0 189 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CCKARP32238 428 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 RTL8BQ17RB0 113 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CT45A1Q5HYN5 189 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR5A2Q8NGI9 324 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 CT45A3Q8NHU0 189 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 M1APQ8TC57 530 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 AUP1Q9Y679 476 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 ROS1P08922 2347 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 HEATR5AQ86XA9 2040 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 PLXNA3P51805 1871 aa11.73□□□□□ -0.53
TRAPPC8-207ENST00000580104 MRPL54Q6P161 138 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 SCN8AQ9UQD0 1980 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 COX7A2P2O60397 106 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 NDUFB4O95168 129 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 EGR1P18146 543 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 FNDC7Q5VTL7 733 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 KLHDC1Q8N7A1 406 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR5D13Q8NGL4 314 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR4P4Q8NGL7 312 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 GINS3Q9BRX5 216 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 ANGPTL4Q9BY76 406 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 NLRC5Q86WI3 1866 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 CBY3A6NI87 242 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 H0Y980 276 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 SNRPCP09234 159 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 DEFA4P12838 97 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 MEOX1P50221 254 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 FGF12P61328 243 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 ERHP84090 104 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 SERF2P84101 59 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 SMRP1Q8NCR6 262 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR10X1Q8NGY0 326 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 LRRC29Q8WV35 223 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 HSD17B10Q99714 261 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 TNFSF15O95150 251 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 HAND1O96004 215 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 GLIPR1P48060 266 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 CDCP2Q5VXM1 449 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
TRAPPC8-207ENST00000580104 DMRTA2Q96SC8 542 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms