RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 FOXI3A8MTJ6 420 aaPredicted RBP10.62□□□□□ -0.71
TRAF4-214ENST00000580073 PDCD5O14737 125 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 BPNT1O95861 308 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 CD24P25063 80 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 RPS19P39019 145 aaKnown RBP10.62□□□□□ -0.71
TRAF4-214ENST00000580073 GLP1RP43220 463 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 RAB7AP51149 207 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 VBP1P61758 197 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 RPL23AP62750 156 aaKnown RBP10.62□□□□□ -0.71
TRAF4-214ENST00000580073 RPS27AP62979 156 aaKnown RBP10.62□□□□□ -0.71
TRAF4-214ENST00000580073 GPR176Q14439 515 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 ATXN7L3Q14CW9 347 aaPredicted RBP10.62□□□□□ -0.71
TRAF4-214ENST00000580073 CTF1Q16619 201 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 TPRA1Q86W33 373 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 FOXRED2Q8IWF2 684 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 OR8H3Q8N146 312 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 TM2D1Q9BX74 207 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 GON7Q9BXV9 100 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 LPAR5Q9H1C0 372 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 ING3Q9NXR8 418 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
TRAF4-214ENST00000580073 GHRLQ9UBU3 117 aa10.62□□□□□ -0.71
TRAF4-214ENST00000580073 TRAV39A0A0B4J263 110 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 KBTBD11-OT1A0A1B0GTJ5 212 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 WI2-2373I1.2A0A1W2PRP0 233 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 FAM172BPA6NC97 362 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 NOTOA8MTQ0 251 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 AIPO00170 330 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 SOCS1O15524 211 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 RAMP3O60896 148 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 MMP23AO75900 390 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 OR7C1O76099 320 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-214ENST00000580073 UBBP0CG47 229 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 CGB3P0DN86 165 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 CGB7P0DN87 165 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 ARSBP15848 533 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 TMEM11P17152 192 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 NFYBP25208 207 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 MYCNOSP40205 109 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 KCNJ3P48549 501 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 MADCAM1Q13477 382 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 HES1Q14469 280 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 PAN3Q58A45 887 aaKnown RBP10.61□□□□□ -0.71
TRAF4-214ENST00000580073 UTF1Q5T230 341 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 GPR107Q5VW38 600 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 RSBN1Q5VWQ0 802 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-214ENST00000580073 C11orf87Q6NUJ2 197 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 C5orf24Q7Z6I8 188 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 ANKRD13BQ86YJ7 626 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 KCNG3Q8TAE7 436 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 MRPS24Q96EL2 167 aaKnown RBP10.61□□□□□ -0.71
TRAF4-214ENST00000580073 DPCDQ9BVM2 203 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-214ENST00000580073 NCOR1P1Q9H4R4 102 aa10.61□□□□□ -0.71
TRAF4-214ENST00000580073 SERPINE3A8MV23 424 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 GABARAPO95166 117 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 SNRNP70P08621 437 aaKnown RBP10.6□□□□□ -0.71
TRAF4-214ENST00000580073 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-214ENST00000580073 SNRPBP14678 240 aaKnown RBP10.6□□□□□ -0.71
TRAF4-214ENST00000580073 CHATP28329 748 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 HOXD3P31249 432 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-214ENST00000580073 GDNFP39905 211 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 THBS3P49746 956 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 PSMD7P51665 324 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 TMEM50BP56557 158 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 MPV17LQ2QL34 196 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 MOGAT2Q3SYC2 334 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 ATAD3CQ5T2N8 411 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 SFXN4Q6P4A7 337 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 BAIAP2L2Q6UXY1 529 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 OR2W3Q7Z3T1 314 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 LINC00596Q86U02 117 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 MRPL41Q8IXM3 137 aaKnown RBP10.6□□□□□ -0.71
TRAF4-214ENST00000580073 FAM89BQ8N5H3 189 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 KLHL30-AS1Q8NEE0 82 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 OR10A7Q8NGE5 316 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 OR5H6Q8NGV6 325 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 KIRREL1Q96J84 757 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 TMEM59Q9BXS4 323 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 BARHL1Q9BZE3 327 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 DAPK2Q9UIK4 370 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 KIF25Q9UIL4 384 aa10.6□□□□□ -0.71
TRAF4-214ENST00000580073 UBE2QL1A1L167 161 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A10PA6NDY2 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A18PA6NE21 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A16PA6NEW6 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A20PA6NIJ5 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A7PA6NKC0 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A12PA8MX19 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A5PA8MXJ8 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A23PA8MXZ1 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 LY6LH3BQJ8 138 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 IL1AP01583 271 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 AMY1AP04745 511 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 AMY2AP04746 511 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A15PP0C7V4 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A13PP0C7W8 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A14PP0C7W9 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 FAM90A24PP0C7X0 464 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 KRTAP10-11P60412 298 aa10.59□□□□□ -0.71
TRAF4-214ENST00000580073 DGCR2P98153 550 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms