RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 RBM11P57052 281 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ALKBH1Q13686 389 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 FLOT2Q14254 428 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ECSCRQ19T08 205 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 MPV17LQ2QL34 196 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 CT45A1Q5HYN5 189 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 C6orf183Q5T699 404 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 KDM4DQ6B0I6 523 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ZNF497Q6ZNH5 498 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 NPBQ8NG41 125 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 CT45A3Q8NHU0 189 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 NEK7Q8TDX7 302 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 CCDC107Q8WV48 283 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 S100A13Q99584 98 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 FAM192AQ9GZU8 254 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 RIBC2Q9H4K1 309 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ZNF446Q9NWS9 450 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 IL36GQ9NZH8 169 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 DHDHQ9UQ10 334 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 DNAH10Q8IVF4 4471 aa9.36□□□□□ -0.91
CDK5RAP3-216ENST00000579853 RBMY1BA6NDE4 496 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 RBMY1EA6NEQ0 496 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 TMEM212A6NML5 194 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 G3V2T6 193 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 GABRPO00591 440 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 SLC31A2O15432 143 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 SOX15O60248 233 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ZNF780AO75290 641 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 NDUFA3O95167 84 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 MT-ND4P03905 459 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 RBMY1DP0C7P1 496 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 CNTFRP26992 372 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ZNF134P52741 427 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 C19orf54Q5BKX5 351 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ATAD3CQ5T2N8 411 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 LPCAT4Q643R3 524 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 TRAT1Q6PIZ9 186 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 CD200R1LQ6Q8B3 271 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 SATL1Q86VE3 508 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 OR10K1Q8NGX5 313 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 OR52N1Q8NH53 320 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 UBALD1Q8TB05 177 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 THTPAQ9BU02 230 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 TMED9Q9BVK6 235 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 METTL9Q9H1A3 318 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 SPACA1Q9HBV2 294 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 RANGRFQ9HD47 186 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 TRAPPC2LQ9UL33 140 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 HECTD4Q9Y4D8 3996 aa9.35□□□□□ -0.91
CDK5RAP3-216ENST00000579853 TCRBV3S1A0A5B6 114 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 J3QLW9 94 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 GEMIN2O14893 280 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ZNF19P17023 458 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 MRPL28Q13084 256 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 MOGAT2Q3SYC2 334 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 AKIRIN2Q53H80 203 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ACTBL2Q562R1 376 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 LCN12Q6JVE5 192 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ZDHHC13Q8IUH4 622 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 ACBD7Q8N6N7 88 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 TSEN15Q8WW01 171 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 TRUB1Q8WWH5 349 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 LINC00476Q8WZB0 136 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 PELI1Q96FA3 418 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 NUBP2Q9Y5Y2 271 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 CEPT1Q9Y6K0 416 aa9.34□□□□□ -0.91
CDK5RAP3-216ENST00000579853 SHISA3A0PJX4 238 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 RGS11O94810 467 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 IGHV3-11P01762 117 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 TFAP2AP05549 437 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 CD2P06729 351 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 TPPP2P59282 170 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 PLGLAQ15195 96 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 SYT6Q5T7P8 510 aaPredicted RBP9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 ZNF529Q6P280 563 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 HAPLN4Q86UW8 402 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 OR10V1Q8NGI7 309 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 OR5AK2Q8NH90 309 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 C4orf36Q96KX1 117 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 RHOVQ96L33 236 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 NABP2Q9BQ15 211 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 ABHD14AQ9BUJ0 271 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 GABARAPL1Q9H0R8 117 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 HIPK2Q9H2X6 1198 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 OR2S2Q9NQN1 319 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 GMPPBQ9Y5P6 360 aa9.33□□□□□ -0.92
CDK5RAP3-216ENST00000579853 A0A0G2JLM5 398 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 SNTNA6NMZ2 147 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 MCRIP1C9JLW8 97 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 J3QRE1 110 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 CA11O75493 328 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 CDRT1O95170 752 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 HBZP02008 142 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 GTF2F2P13984 249 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 CX3CL1P78423 397 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 NDPQ00604 133 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 TATDN3Q17R31 274 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 LRRC36Q1X8D7 754 aa9.32□□□□□ -0.92
CDK5RAP3-216ENST00000579853 SYS1Q8N2H4 156 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms