RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 S100A13Q99584 98 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 TBX5Q99593 518 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 MICU1Q9BPX6 476 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 SULT4A1Q9BR01 284 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 RIOK2Q9BVS4 552 aaKnown RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 SCRT1Q9BWW7 348 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 RSPO3Q9BXY4 272 aaPredicted RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 TTTY10Q9BZA0 68 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 ULBP1Q9BZM6 244 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 OR8D2Q9GZM6 311 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 CHST6Q9GZX3 395 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 POLR2J3Q9H1A7 115 aaKnown RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 DEFB129Q9H1M3 183 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 CXCL16Q9H2A7 254 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 OR51I1Q9H343 314 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 C1orf198Q9H425 327 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 EXO5Q9H790 373 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 NT5MQ9NPB1 228 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF302Q9NR11 478 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 PARP11Q9NR21 331 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 PXMP2Q9NR77 195 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 DDIT4Q9NX09 232 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 MARCH5Q9NX47 278 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 TAS2R13Q9NYV9 303 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 GSKIPQ9P0R6 139 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 SPRR3Q9UBC9 169 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF282Q9UDV7 671 aaPredicted RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 SHPKQ9UHJ6 478 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 NOP16Q9Y3C1 178 aaKnown RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 AK6Q9Y3D8 172 aaKnown RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 MTCH2Q9Y6C9 303 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 SLCO1B1Q9Y6L6 691 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 HELZP42694 1942 aaKnown RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 SCN8AQ9UQD0 1980 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 NUP205Q92621 2012 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 FER1L5A0AVI2 2057 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 NUP214P35658 2090 aaPredicted RBP1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 PIKFYVEQ9Y2I7 2098 aa1.55□□□□□ -2.16
PTP4A1-204ENST00000578299 NINQ8N4C6 2090 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 A0A087WZY1 265 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TRBV6-7A0A0A0MS04 114 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TRAV1-2A0A0B4J238 106 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TRBV11-1A0A0K0K1C0 115 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 MGAT4DA6NG13 374 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TVP23AA6NH52 213 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF727A8MUV8 499 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF705GA8MUZ8 300 aaPredicted RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 LOC730098B7Z3J9 87 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TRDCB7Z8K6 153 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 EEF1E1-BLOC1S5C9J1V9 151 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 F8WDY8 70 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 K7EPK0 472 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 CLDN5O00501 218 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 PIN1P1O15428 100 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 CCL25O15444 150 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 ZNF264O43296 627 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TBL1XO60907 577 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 GGCTO75223 188 aaKnown RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 GLSO94925 669 aaPredicted RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 ETHE1O95571 254 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 CYB5R3P00387 301 aaPredicted RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 IGLV1-47P01700 117 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 IGLV3-25P01717 112 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TRBC1P01850 177 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 HLA-AP01891 365 aaKnown RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 IFNA6P05013 189 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 DCNP07585 359 aaKnown RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 CTSLP07711 333 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 IL3P08700 152 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 MMP7P09237 267 aaPredicted RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC35G6P0C7Q6 338 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 PGA4P0DJD7 388 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 PGA5P0DJD9 388 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 GTF2F2P13984 249 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TBPP20226 339 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 GZMHP20718 246 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 FUT3P21217 361 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 MDKP21741 143 aaPredicted RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 BCKDHBP21953 392 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 PPIBP23284 216 aaKnown RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 GABRR1P24046 479 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 MMP11P24347 488 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 TEAD1P28347 426 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 FAUP35544 74 aaKnown RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 ARR3P36575 388 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 GPR4P46093 362 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 CAPZBP47756 277 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 SULT1A2P50226 295 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 FGF8P55075 233 aaPredicted RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 RGS8P57771 180 aaPredicted RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 KRTAP12-2P59991 146 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 PRPS1P60891 318 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 RAP1BP61224 184 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 RPS11P62280 158 aaKnown RBP eCLIP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 EIF5AP63241 154 aaKnown RBP1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 HBA1P69905 142 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 NTHL1P78549 312 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 CDK5Q00535 292 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 PAX5Q02548 391 aa1.54□□□□□ -2.16
PTP4A1-204ENST00000578299 SLC10A7Q0GE19 358 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 556.2 ms