RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 GEMIN2O14893 280 aaKnown RBP7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 TXNL1O43396 289 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 ORC5O43913 435 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 OR7C1O76099 320 aaPredicted RBP7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 CDRT1O95170 752 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 BAG2O95816 211 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 HLA-DRB1P01911 266 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 MT-ND4P03905 459 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 RBMY1DP0C7P1 496 aaKnown RBP7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 ZNF19P17023 458 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 CCR9P51686 369 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 ZNF137PP52743 207 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 NDPQ00604 133 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 LSAMPQ13449 338 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 RSU1Q15404 277 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 IZUMO2Q6UXV1 221 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 C5orf24Q7Z6I8 188 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 SERPINA12Q8IW75 414 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 OR51A2Q8NGJ7 313 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 ZNF251Q9BRH9 671 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 ELOVL1Q9BW60 279 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 FAM192AQ9GZU8 254 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 ING4Q9UNL4 249 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 MRPS28Q9Y2Q9 187 aaKnown RBP7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 A3GALT2U3KPV4 340 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 RYR1P21817 5038 aa7.74□□□□□ -1.17
NPLOC4-220ENST00000576940 DAPL1A0PJW8 107 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 SLC16A6O15403 523 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 NBR2O15453 112 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 EGR2P11161 476 aaPredicted RBP7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 ALKBH1Q13686 389 aaKnown RBP7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 LRRC36Q1X8D7 754 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 C5orf64Q2M2E5 130 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 C19orf54Q5BKX5 351 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 ATAD3CQ5T2N8 411 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 KDM4DQ6B0I6 523 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 ASCL4Q6XD76 172 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 KCTD20Q7Z5Y7 419 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 PRR18Q8N4B5 295 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 PARP16Q8N5Y8 322 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 OR1L1Q8NH94 360 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 IL17DQ8TAD2 202 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 FLYWCH2Q96CP2 140 aaKnown RBP7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 PELI1Q96FA3 418 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 RHOVQ96L33 236 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 Q9H521 79 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 TUBA4BQ9H853 241 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 GNG12Q9UBI6 72 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 STUB1Q9UNE7 303 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 NUBP2Q9Y5Y2 271 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 HECTD4Q9Y4D8 3996 aa7.73□□□□□ -1.17
NPLOC4-220ENST00000576940 G3V2T6 193 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 J3QRE1 110 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 AIPO00170 330 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 FCN1O00602 326 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 LANCL1O43813 399 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 ADARB1P78563 741 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 TMED1Q13445 227 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 Q3ZCU0 254 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 SYT6Q5T7P8 510 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 ZNF497Q6ZNH5 498 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 ODF3L1Q8IXM7 274 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 NPBQ8NG41 125 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 OR4K15Q8NH41 348 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 OR52N1Q8NH53 320 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 NEK7Q8TDX7 302 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 CYYR1Q96J86 154 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 C4orf36Q96KX1 117 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 NABP2Q9BQ15 211 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 FAM103A1Q9BTL3 118 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 HIPK2Q9H2X6 1198 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 IFT22Q9H7X7 185 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 ISG20L2Q9H9L3 353 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 TRAPPC2LQ9UL33 140 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 DHDHQ9UQ10 334 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 FOXA2Q9Y261 457 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 ERGIC3Q9Y282 383 aa7.72□□□□□ -1.17
NPLOC4-220ENST00000576940 A0A1W2PP11 408 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 E9PI62 339 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 MAGEB3O15480 346 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 SPINT2O43291 252 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 SLC25A17O43808 307 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 BRI3O95415 125 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 LY6G6CO95867 125 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 HBZP02008 142 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 ALPLP05186 524 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 SNRPBP14678 240 aaKnown RBP7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 RCC1P18754 421 aaPredicted RBP7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 RAB3AP20336 220 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 ALDH3A2P51648 485 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 AQP4P55087 323 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 RBM11P57052 281 aaKnown RBP7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 TPPP2P59282 170 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 CX3CL1P78423 397 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 RAB40BQ12829 278 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 MORN2Q502X0 79 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 ZNF660Q6AZW8 331 aaPredicted RBP7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 IL34Q6ZMJ4 242 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 LHFPL3Q86UP9 236 aa7.71□□□□□ -1.18
NPLOC4-220ENST00000576940 OR52L2PQ8NGH6 319 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms