RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 COMMD5Q9GZQ3 224 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 E9PQ18 207 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 TDHQ8IZJ6 230 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 DMRTA2Q96SC8 542 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 RPRMQ9NS64 109 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 DUXBA0A1W2PPF3 345 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 RPL36A-HNRNPH2H7BZ11 118 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 TPPP2P59282 170 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 OR2Y1Q8NGV0 311 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 OR4C12Q96R67 309 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 FKBP11Q9NYL4 201 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.46■□□□□ 0.075e-6■■■■□ 22.8
ATPAF1-214ENST00000576409 IGKV1-9A0A0C4DH69 117 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 A0A1W2PPE3 182 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 IGFBP3P17936 291 aaPredicted RBP15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 PLAURQ03405 335 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 ZNF718Q3SXZ3 478 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 PITPNC1Q9UKF7 332 aa15.46■□□□□ 0.07
ATPAF1-214ENST00000576409 MELTFP08582 738 aa15.46■□□□□ 0.06
ATPAF1-214ENST00000576409 TMEM187Q14656 261 aa15.46■□□□□ 0.06
ATPAF1-214ENST00000576409 DHRS13Q6UX07 377 aa15.46■□□□□ 0.06
ATPAF1-214ENST00000576409 SGMS2Q8NHU3 365 aa15.46■□□□□ 0.06
ATPAF1-214ENST00000576409 RAB9BQ9NP90 201 aa15.46■□□□□ 0.06
ATPAF1-214ENST00000576409 NOTCH4Q99466 2003 aa15.46■□□□□ 0.06
ATPAF1-214ENST00000576409 CRISP2P16562 243 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 GNB1P62873 340 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 MZT1Q08AG7 82 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 COL13A1Q5TAT6 717 aaPredicted RBP15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 EDARADDQ8WWZ3 215 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 GPR146Q96CH1 333 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 KCNIP2Q9NS61 270 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 IGSF23A1L1A6 192 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 MRPL54Q6P161 138 aaKnown RBP15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 ZNF818PQ6ZRF7 136 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 SLC35E3Q7Z769 313 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 VN1R17PQ8TDU5 208 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 TECTBQ96PL2 329 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 TAAR9Q96RI9 348 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 TMEM147Q9BVK8 224 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 KLF13Q9Y2Y9 288 aaPredicted RBP15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 ASPHD2Q6ICH7 369 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 CMTM2Q8TAZ6 248 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 SLC35E1Q96K37 410 aa15.45■□□□□ 0.06
ATPAF1-214ENST00000576409 M0R1B8 84 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 TNFSF15O95150 251 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 CEBPDP49716 269 aaPredicted RBP15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 IL11RAQ14626 422 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 C5orf24Q7Z6I8 188 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 ABHD14BQ96IU4 210 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 MYOZ1Q9NP98 299 aaPredicted RBP15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 OR1A1Q9P1Q5 309 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 ZNF835Q9Y2P0 537 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 ELOA3CA0A087WX78 387 aaPredicted RBP15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 ST8SIA5O15466 376 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 MOB3AQ96BX8 217 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 FAM173AQ9BQD7 235 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 ELOVL1Q9BW60 279 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 LRRK1Q38SD2 2015 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 A0A0A6YYD4 124 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 GALR2O43603 387 aaPredicted RBP15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 PITX3O75364 302 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 RNF224P0DH78 156 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 CDX1P47902 265 aaPredicted RBP15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 CCL20P78556 96 aa15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 WDR74Q6RFH5 385 aaPredicted RBP15.44■□□□□ 0.06
ATPAF1-214ENST00000576409 PKIAP61925 76 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 SMIM21Q3B7S5 101 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 OR2J1Q9GZK6 312 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 SIRT7Q9NRC8 400 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 TRGV5A0A0B4J1U4 118 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 C5orf63A6NC05 138 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 ZNF253O75346 499 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 NDUFB4O95168 129 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 SELEP16581 610 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 IER3P46695 156 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 HNRNPA3P51991 378 aaKnown RBP15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 ZNF826PQ6ZT77 177 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 CALHM1Q8IU99 346 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 OR10S1Q8NGN2 331 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 ARRDC1-AS1Q9H2J1 176 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 C20orf202A1L168 122 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 CBY3A6NI87 242 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 M0R143 59 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 DDTP30046 118 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 OR10G8Q8NGN5 311 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 VPS25Q9BRG1 176 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 FAM117AQ9C073 453 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 RBKSQ9H477 322 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 PQLC2LA1A4F0 135 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 SMRP1Q8NCR6 262 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 SMIM8Q96KF7 97 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 TAAR6Q96RI8 345 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 TBX15Q96SF7 602 aa15.43■□□□□ 0.06
ATPAF1-214ENST00000576409 AGFG2O95081 481 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 OR4P4Q8NGL7 312 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 HSD17B10Q99714 261 aaKnown RBP15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 SRD5A3Q9H8P0 318 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 IL36RNQ9UBH0 155 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 TUBD1Q9UJT1 453 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 PGLYRP1O75594 196 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms