RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 FOXI3A8MTJ6 420 aaPredicted RBP9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 UMAD1C9J7I0 102 aa9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 HOXD4P09016 255 aaPredicted RBP9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 PGA5P0DJD9 388 aa9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 TNFRSF1AP19438 455 aa9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 PPP1CCP36873 323 aaKnown RBP9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 BAXQ07812 192 aa9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 SOHLH1Q5JUK2 328 aa9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 H1FXQ92522 213 aaKnown RBP9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 OR2V2Q96R30 315 aa9.9□□□□□ -0.82
PDXDC1-217ENST00000570001 TRGV10A0A0A0MS01 117 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 SYNGR2O43760 224 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 HBZP02008 142 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 FGF2P09038 288 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 DYNLT3P51808 116 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 KRTAP27-1Q3LI81 207 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 STPG2Q8N412 459 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 OR1L1Q8NH94 360 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 GTF3AQ92664 365 aaKnown RBP9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 HEYLQ9NQ87 328 aaPredicted RBP9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 ADAMTS20P59510 1910 aa9.9□□□□□ -0.83
PDXDC1-217ENST00000570001 IGHV3OR15-7A0A075B7D8 119 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 IGKV1D-13A0A0B4J2D9 117 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 C16orf97H3BN30 126 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 M0R1X1 148 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 IGKV1-13P0DP09 117 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 OR52L2PQ8NGH6 319 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 BOD1Q96IK1 185 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 SFXN3Q9BWM7 321 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 NAPSAO96009 420 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 IGHV3-13P01766 116 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 IGHV3-7P01780 117 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 TIMM23BQ5SRD1 257 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 TREM2Q9NZC2 230 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 PUS1Q9Y606 427 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 IFNA4P05014 189 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 SFTA3P0C7M3 94 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 SEC11BP0C7V7 166 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 METTL15P1P0C7V9 234 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 OR13C7P0DN81 318 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 GZMHP20718 246 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 ELLP55199 621 aaPredicted RBP9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 RND3P61587 244 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 C1orf87Q8N0U7 546 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 RAB39BQ96DA2 213 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 S1PR3Q99500 378 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 CPAMD8Q8IZJ3 1885 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 ROS1P08922 2347 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 ATP6V1G2-DDX39BF2Z307 99 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 UBAC2Q8NBM4 344 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 PLPPR1Q8TBJ4 325 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 HIPK2Q9H2X6 1198 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 PLSCR4Q9NRQ2 329 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 UQCC1Q9NVA1 299 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 CRIM1Q9NZV1 1036 aa9.89□□□□□ -0.83
PDXDC1-217ENST00000570001 TRBV6-7A0A0A0MS04 114 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 CD200P41217 278 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 HOXA1P49639 335 aaPredicted RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 SULT1A2P50226 295 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 TMEM252Q8N6L7 170 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 ZBTB34Q8NCN2 500 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 NRIP2Q9BQI9 281 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 OR6C3Q9NZP0 311 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 HMGB3O15347 200 aaKnown RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 DVL1P1P54792 670 aaPredicted RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 GUK1Q16774 197 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 C5orf24Q7Z6I8 188 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 H1FOOQ8IZA3 346 aaPredicted RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 OR10P1Q8NGE3 313 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 MSI2Q96DH6 328 aaKnown RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 CIB3Q96Q77 187 aaPredicted RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 RCC2Q9P258 522 aaKnown RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 FCGR3BO75015 233 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 WT1P19544 449 aaPredicted RBP9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 RHEBQ15382 184 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 C18orf12Q96KH6 178 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 SLC39A9Q9NUM3 307 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 RNF7Q9UBF6 113 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 KIAA2026Q5HYC2 2103 aa9.88□□□□□ -0.83
PDXDC1-217ENST00000570001 UCP1P25874 307 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 HAGHQ16775 308 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 ACP7Q6ZNF0 438 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 ITLN1Q8WWA0 313 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 IL22RA2Q969J5 263 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 TP53TG5Q9Y2B4 290 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 SRSF7Q16629 238 aaKnown RBP eCLIP9.87□□□□□ -0.837e-8■■■□□ 16.5
PDXDC1-217ENST00000570001 STARD4Q96DR4 205 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 ABHD17AQ96GS6 310 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 SIGLEC5O15389 551 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 ADH4P08319 380 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 PTAFRP25105 342 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 GLIPR1P48060 266 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 ABHD5Q8WTS1 349 aa9.87□□□□□ -0.83
PDXDC1-217ENST00000570001 GPR146Q96CH1 333 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms