RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ARSJQ5FYB0 599 aaPredicted RBP6.18□□□□□ -1.42
CDH3-209ENST00000569080 TRAT1Q6PIZ9 186 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 ETV3LQ6ZN32 361 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 PRSS48Q7RTY5 328 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 CEACAM19Q7Z692 300 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 ODF3L1Q8IXM7 274 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 SVOPQ8N4V2 548 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 Q8N9W7 124 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 OR10V1Q8NGI7 309 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 OR6M1Q8NGM8 313 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 UFD1Q92890 307 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 NOL4LQ96MY1 436 aaPredicted RBP6.18□□□□□ -1.42
CDH3-209ENST00000569080 NICN1Q9BSH3 213 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 TMEM59Q9BXS4 323 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 TAF9BQ9HBM6 251 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 ISYNA1Q9NPH2 558 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 PLSCR3Q9NRY6 295 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 SCN3BQ9NY72 215 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 JPT1Q9UK76 154 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 TRAPPC2LQ9UL33 140 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 UBE2QL1A1L167 161 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 LINC01548A6NM66 108 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 H3BUI4 141 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 SLC17A2O00624 439 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 SPINT2O43291 252 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 RGS10O43665 173 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 LANCL1O43813 399 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 BPNT1O95861 308 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 PRB2P02812 416 aaPredicted RBP6.17□□□□□ -1.42
CDH3-209ENST00000569080 GAPDHP04406 335 aaKnown RBP6.17□□□□□ -1.42
CDH3-209ENST00000569080 CPEP16870 476 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 SRMP19623 302 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 CD1BP29016 333 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 MAP2K4P45985 399 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 HTD2P86397 168 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 FABP5Q01469 135 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 LSAMPQ13449 338 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 HES1Q14469 280 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 HNF4GQ14541 408 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 SSX1Q16384 188 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 MORN2Q502X0 79 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 C9orf152Q5JTZ5 239 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 NKAPLQ5M9Q1 402 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 STEAP3Q658P3 488 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 GLT8D1Q68CQ7 371 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 ZNF880Q6PDB4 577 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 IZUMO2Q6UXV1 221 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 C6orf201Q7Z4U5 140 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 MOB3BQ86TA1 216 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 ZNF329Q86UD4 541 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 TGIF2LXQ8IUE1 241 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 PRR18Q8N4B5 295 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 FAM71E2Q8N5Q1 922 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 OR4X2Q8NGF9 303 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 OR52L2PQ8NGH6 319 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 TMEM203Q969S6 136 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 PHF21AQ96BD5 680 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 ABHD14AQ9BUJ0 271 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 LPAR5Q9H1C0 372 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 ABCG5Q9H222 651 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 IFI27L2Q9H2X8 130 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 GNG12Q9UBI6 72 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 TPRKBQ9Y3C4 175 aa6.17□□□□□ -1.42
CDH3-209ENST00000569080 TSSC4Q9Y5U2 329 aaPredicted RBP6.17□□□□□ -1.42
CDH3-209ENST00000569080 TRBV6-6A0A0A6YYG2 114 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 TCRBV4S1A1TA0A5B7 111 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 PSMB11A5LHX3 300 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 LDLRAD4O15165 306 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 TXNL1O43396 289 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 MOSP00540 346 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 HSMCR30P0CW71 290 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 PSMA1P25786 263 aaKnown RBP6.16□□□□□ -1.42
CDH3-209ENST00000569080 IL3RAP26951 378 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 PPP1CCP36873 323 aaKnown RBP6.16□□□□□ -1.42
CDH3-209ENST00000569080 GPR12P47775 334 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 RPL23AP62750 156 aaKnown RBP6.16□□□□□ -1.42
CDH3-209ENST00000569080 CFHR3Q02985 330 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 LY6G6FQ5SQ64 297 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 ZNF833PQ6ZTB9 187 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 C18orf65Q6ZTR6 163 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 OR2W3Q7Z3T1 314 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 SLC35E3Q7Z769 313 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 CENPVQ7Z7K6 275 aaPredicted RBP6.16□□□□□ -1.42
CDH3-209ENST00000569080 STPG2Q8N412 459 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 FAM89BQ8N5H3 189 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 LINC00482Q8N8I6 264 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 OR2T10Q8NGZ9 312 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 KCNG3Q8TAE7 436 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 MGLLQ99685 303 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 HSPB9Q9BQS6 159 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 ZNF251Q9BRH9 671 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 FAAP24Q9BTP7 215 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 MRPL20Q9BYC9 149 aaKnown RBP6.16□□□□□ -1.42
CDH3-209ENST00000569080 PARP12Q9H0J9 701 aaKnown RBP6.16□□□□□ -1.42
CDH3-209ENST00000569080 RAB9BQ9NP90 201 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 OR2S2Q9NQN1 319 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 LIN7CQ9NUP9 197 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms