RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 RSU1Q15404 277 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 C5orf64Q2M2E5 130 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 CT45A1Q5HYN5 189 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 NHLRC3Q5JS37 347 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 LIN54Q6MZP7 749 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 TCTEX1D1Q8N7M0 179 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 CT45A3Q8NHU0 189 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 UBALD1Q8TB05 177 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 TNFAIP8L1Q8WVP5 186 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 ZNF251Q9BRH9 671 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 ANKRD60Q9BZ19 345 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 ST3GAL6Q9Y274 331 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 GMPPBQ9Y5P6 360 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 HERC2O95714 4834 aa9.56□□□□□ -0.88
SNX29-207ENST00000568949 A0A1W2PN81 502 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 C12orf77C9JDV5 145 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 GABRPO00591 440 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 SLC16A6O15403 523 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 NBR2O15453 112 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 OR7C1O76099 320 aaPredicted RBP9.55□□□□□ -0.88
SNX29-207ENST00000568949 MT-ND4P03905 459 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 CSTBP04080 98 aaKnown RBP9.55□□□□□ -0.88
SNX29-207ENST00000568949 CHRNA7P36544 502 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 RAB40BQ12829 278 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 ALKBH1Q13686 389 aaKnown RBP9.55□□□□□ -0.88
SNX29-207ENST00000568949 TTC23Q5W5X9 447 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 ZNF660Q6AZW8 331 aaPredicted RBP9.55□□□□□ -0.88
SNX29-207ENST00000568949 PYHIN1Q6K0P9 492 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 HAPLN4Q86UW8 402 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 NPBQ8NG41 125 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 OR10K1Q8NGX5 313 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 CCDC107Q8WV48 283 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 TUBA4BQ9H853 241 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 SMPD3Q9NY59 655 aaPredicted RBP9.55□□□□□ -0.88
SNX29-207ENST00000568949 ZNF581Q9P0T4 197 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 GNG12Q9UBI6 72 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
SNX29-207ENST00000568949 LOC100130705A0A1B0GUX0 176 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 H0Y980 276 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 MAGEB3O15480 346 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 SPINT2O43291 252 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 NDUFA3O95167 84 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 HTR3BO95264 441 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 RAB3AP20336 220 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 CNTFRP26992 372 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 RBM11P57052 281 aaKnown RBP9.54□□□□□ -0.88
SNX29-207ENST00000568949 ECSCRQ19T08 205 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 LPCAT4Q643R3 524 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 ZNF497Q6ZNH5 498 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 LINC00596Q86U02 117 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 SATL1Q86VE3 508 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 SETD9Q8NE22 299 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 PELI1Q96FA3 418 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 RITA1Q96K30 269 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 RHOVQ96L33 236 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 GPER1Q99527 375 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 RSRP1Q9BUV0 290 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 IL36GQ9NZH8 169 aa9.54□□□□□ -0.88
SNX29-207ENST00000568949 DAPL1A0PJW8 107 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 IRGMA1A4Y4 181 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 RBMY1BA6NDE4 496 aaKnown RBP9.53□□□□□ -0.88
SNX29-207ENST00000568949 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
SNX29-207ENST00000568949 J3QRE1 110 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 AIPO00170 330 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 IGHV3-11P01762 117 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
SNX29-207ENST00000568949 NDPQ00604 133 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 TMEM267Q0VDI3 215 aaPredicted RBP9.53□□□□□ -0.88
SNX29-207ENST00000568949 RCN1Q15293 331 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 MPV17LQ2QL34 196 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 ZNF529Q6P280 563 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 CD200R1LQ6Q8B3 271 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 GTSCR1Q86UQ5 136 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 STX19Q8N4C7 294 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 OR52N1Q8NH53 320 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 CASTOR1Q8WTX7 329 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 THAP7Q9BT49 309 aaPredicted RBP9.53□□□□□ -0.88
SNX29-207ENST00000568949 TMED9Q9BVK6 235 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 FAM192AQ9GZU8 254 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 HIPK2Q9H2X6 1198 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 VCX3BQ9H321 246 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 KIAA1456Q9P272 454 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 RNF150Q9ULK6 438 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 FBXO7Q9Y3I1 522 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 NUBP2Q9Y5Y2 271 aa9.53□□□□□ -0.88
SNX29-207ENST00000568949 J3QLW9 94 aa9.52□□□□□ -0.89
SNX29-207ENST00000568949 GEMIN2O14893 280 aaKnown RBP9.52□□□□□ -0.89
SNX29-207ENST00000568949 SLC25A17O43808 307 aa9.52□□□□□ -0.89
SNX29-207ENST00000568949 RGS11O94810 467 aa9.52□□□□□ -0.89
SNX29-207ENST00000568949 CDRT1O95170 752 aa9.52□□□□□ -0.89
SNX29-207ENST00000568949 FADS2O95864 444 aaKnown RBP9.52□□□□□ -0.89
SNX29-207ENST00000568949 EGR2P11161 476 aaPredicted RBP9.52□□□□□ -0.89
SNX29-207ENST00000568949 ZNF19P17023 458 aa9.52□□□□□ -0.89
SNX29-207ENST00000568949 ZP3P21754 424 aa9.52□□□□□ -0.89
SNX29-207ENST00000568949 POLR2IP36954 125 aaKnown RBP9.52□□□□□ -0.89
SNX29-207ENST00000568949 CX3CL1P78423 397 aa9.52□□□□□ -0.89
SNX29-207ENST00000568949 MRPL28Q13084 256 aaKnown RBP9.52□□□□□ -0.89
SNX29-207ENST00000568949 MED21Q13503 144 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms