RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ACOT13Q9NPJ3 140 aa14.7□□□□□ -0.06
LINC01238-205ENST00000567549 KCNIP1Q9NZI2 227 aa14.7□□□□□ -0.06
LINC01238-205ENST00000567549 C15orf65H3BRN8 121 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 ZNF701M0R085 212 aaPredicted RBP14.69□□□□□ -0.06
LINC01238-205ENST00000567549 MT-ND4P03905 459 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 VDAC1P21796 283 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 GPR12P47775 334 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 DGCR2P98153 550 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 FOXE3Q13461 319 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 IRF3Q14653 427 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 SYT6Q5T7P8 510 aaPredicted RBP14.69□□□□□ -0.06
LINC01238-205ENST00000567549 OR2G6Q5TZ20 316 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 UBE2UQ5VVX9 321 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 C8orf86Q6ZUL3 223 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 NKAIN3Q8N8D7 197 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 OR5M8Q8NGP6 311 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 OR13F1Q8NGS4 319 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 GHSRQ92847 366 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 ETAA1Q9NY74 926 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 ERGIC3Q9Y282 383 aa14.69□□□□□ -0.06
LINC01238-205ENST00000567549 MRPS28Q9Y2Q9 187 aaKnown RBP14.69□□□□□ -0.06
LINC01238-205ENST00000567549 TRBV5-5A0A0J9YX44 114 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 A0A1W2PPE3 182 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 CCDC160A6NGH7 325 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 SOX6P35712 828 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 REG1BP48304 166 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 ZNF137PP52743 207 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 GPR50Q13585 617 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 DIAPH2-AS1Q14236 149 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 AWAT2Q6E213 333 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 ETV3LQ6ZN32 361 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 CCDC107Q8WV48 283 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 GHRLQ9UBU3 117 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 CEPT1Q9Y6K0 416 aa14.68□□□□□ -0.06
LINC01238-205ENST00000567549 TRAV39A0A0B4J263 110 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 CCL24O00175 119 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 RGS11O94810 467 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 IGFBP3P17936 291 aaPredicted RBP14.67□□□□□ -0.06
LINC01238-205ENST00000567549 HOXD3P31249 432 aaPredicted RBP14.67□□□□□ -0.06
LINC01238-205ENST00000567549 MAP2K4P45985 399 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 CDX1P47902 265 aaPredicted RBP14.67□□□□□ -0.06
LINC01238-205ENST00000567549 UTF1Q5T230 341 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 DMKNQ6E0U4 476 aaPredicted RBP14.67□□□□□ -0.06
LINC01238-205ENST00000567549 RAB12Q6IQ22 244 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 SLC25A48Q6ZT89 311 aaKnown RBP14.67□□□□□ -0.06
LINC01238-205ENST00000567549 Q8N6K4 173 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 S1PR3Q99500 378 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 P2RX4Q99571 388 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 B9D2Q9BPU9 175 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 RBM38Q9H0Z9 239 aaKnown RBP14.67□□□□□ -0.06
LINC01238-205ENST00000567549 CST11Q9H112 138 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 RCC2Q9P258 522 aaKnown RBP14.67□□□□□ -0.06
LINC01238-205ENST00000567549 ZNF580Q9UK33 172 aa14.67□□□□□ -0.06
LINC01238-205ENST00000567549 IGHV3-72A0A0B4J1Y9 119 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 NOL3O60936 208 aaKnown RBP14.66□□□□□ -0.06
LINC01238-205ENST00000567549 FUT3P21217 361 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 RAB25P57735 213 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 DOC2BQ14184 412 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 C9orf66Q5T8R8 295 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 GLIPR1L1Q6UWM5 242 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 ZNF367Q7RTV3 350 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 Q8N9W7 124 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 ST6GALNAC6Q969X2 333 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 MND1Q9BWT6 205 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 RSL24D1Q9UHA3 163 aaKnown RBP14.66□□□□□ -0.06
LINC01238-205ENST00000567549 LINC00527Q9UJ94 153 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 PEX16Q9Y5Y5 336 aa14.66□□□□□ -0.06
LINC01238-205ENST00000567549 WI2-2373I1.2A0A1W2PRP0 233 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 MYL12BO14950 172 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 LANCL1O43813 399 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 PSMB9P28065 219 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 TMBIM6P55061 237 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 KRTAP10-11P60412 298 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 KIR2DS1Q14954 304 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 TMEM65Q6PI78 240 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 CLVS1Q8IUQ0 354 aaPredicted RBP14.65□□□□□ -0.06
LINC01238-205ENST00000567549 PRR18Q8N4B5 295 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 UQCC2Q9BRT2 126 aa14.65□□□□□ -0.06
LINC01238-205ENST00000567549 IGHV3-43A0A0B4J1X8 118 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 C12orf77C9JDV5 145 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 CRTAPO75718 401 aaPredicted RBP14.64□□□□□ -0.07
LINC01238-205ENST00000567549 HBZP02008 142 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 CD1AP06126 327 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 NHLRC4P0CG21 123 aaPredicted RBP14.64□□□□□ -0.07
LINC01238-205ENST00000567549 UBBP0CG47 229 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 IGHV3-43DP0DP04 118 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 MGMTP16455 207 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 GPR107Q5VW38 600 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 NANOGP1Q8N7R0 232 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 RNF152Q8N8N0 203 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 TMEM104Q8NE00 496 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 BCL7BQ9BQE9 202 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 SELENOIQ9C0D9 397 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 OR2S2Q9NQN1 319 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 JPT1Q9UK76 154 aa14.64□□□□□ -0.07
LINC01238-205ENST00000567549 SC5DO75845 299 aa14.63□□□□□ -0.07
LINC01238-205ENST00000567549 IGHG4P01861 327 aa14.63□□□□□ -0.07
LINC01238-205ENST00000567549 IGF1P05019 195 aa14.63□□□□□ -0.07
LINC01238-205ENST00000567549 RANBP1P43487 201 aa14.63□□□□□ -0.07
LINC01238-205ENST00000567549 GAPTQ8N292 157 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms