RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ZNF573Q86YE8 665 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 IL22RA2Q969J5 263 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 RAB40CQ96S21 281 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 LINC00470Q9BZP3 86 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 B4GALT7Q9UBV7 327 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 A0A087WWC5 75 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 SIRPB1O00241 398 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 SYNGR2O43760 224 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 HOXA5P20719 270 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 APLNRP35414 380 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 CLDN18P56856 261 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 GNG3P63215 75 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 MCEMP1Q8IX19 187 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 POM121L2Q96KW2 1035 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 TRAPPC2LQ9UL33 140 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 MRPS18CQ9Y3D5 142 aaKnown RBP12.11□□□□□ -0.47
CDH1-209ENST00000566510 TNRC6BQ9UPQ9 1833 aaKnown RBP12.11□□□□□ -0.47
CDH1-209ENST00000566510 TNRC6AQ8NDV7 1962 aaKnown RBP12.11□□□□□ -0.47
CDH1-209ENST00000566510 ARR3P36575 388 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 GLIPR1P48060 266 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 PLGLB1Q02325 96 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 TLE1Q04724 770 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 H1FOOQ8IZA3 346 aaPredicted RBP12.11□□□□□ -0.47
CDH1-209ENST00000566510 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 ZNF703Q9H7S9 590 aaPredicted RBP12.11□□□□□ -0.47
CDH1-209ENST00000566510 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
CDH1-209ENST00000566510 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
CDH1-209ENST00000566510 LOC102723971A0A1B0GUV8 181 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 NEURL1O76050 574 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 CDX1P47902 265 aaPredicted RBP12.1□□□□□ -0.47
CDH1-209ENST00000566510 ELLP55199 621 aaPredicted RBP12.1□□□□□ -0.47
CDH1-209ENST00000566510 ZXDAP98168 799 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 C4orf17Q53FE4 359 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 SPNS3Q6ZMD2 512 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 IGKV1-39P01597 117 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 IGKV1D-39P04432 117 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 ARL16Q0P5N6 197 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
CDH1-209ENST00000566510 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 OR14J1Q9UGF5 321 aa12.1□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 WNT5AP41221 380 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 NKX6-1P78426 367 aaPredicted RBP12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
CDH1-209ENST00000566510 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 SIRT7Q9NRC8 400 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 PRSS50Q9UI38 385 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 PCSK5Q92824 1860 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 USF3Q68DE3 2245 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 IFITM10A6NMD0 228 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 BCL2P10415 239 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 CLN3Q13286 438 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 OR1C1Q15619 314 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 GFI1BQ5VTD9 330 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 TTTY12Q9BZ98 90 aa12.09□□□□□ -0.47
CDH1-209ENST00000566510 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 KIAA1324LA8MWY0 1029 aaPredicted RBP12.08□□□□□ -0.48
CDH1-209ENST00000566510 B4E171 279 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 LAMTOR5O43504 91 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 COX5BP10606 129 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 TSPAN7P41732 249 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 HBG1P69891 147 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 HBG2P69892 147 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 PYY3Q5JQD4 70 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 SP5Q6BEB4 398 aaPredicted RBP12.08□□□□□ -0.48
CDH1-209ENST00000566510 SSX7Q7RTT5 188 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 LINC00596Q86U02 117 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 OR10D4PQ8NGN7 298 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 MPC1Q9Y5U8 109 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 CEACAM6P40199 344 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 GTF3AQ92664 365 aaKnown RBP12.08□□□□□ -0.48
CDH1-209ENST00000566510 FAM210BQ96KR6 192 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 NCOR1O75376 2440 aa12.08□□□□□ -0.48
CDH1-209ENST00000566510 PPP1R2P9O14990 202 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 HMGB3O15347 200 aaKnown RBP12.07□□□□□ -0.48
CDH1-209ENST00000566510 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 TESK1Q15569 626 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 ZNF726P1Q15940 193 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 OR2B11Q5JQS5 317 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 C9orf152Q5JTZ5 239 aa12.07□□□□□ -0.48
CDH1-209ENST00000566510 FAM90A2PQ658T7 463 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms