RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
TSR3-202ENST00000566296 TRAV24A0A0B4J272 114 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 NPIPB11E5RHQ5 1161 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 PDCD5O14737 125 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 HSD17B6O14756 317 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 GABARAPO95166 117 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 IGHG2P01859 326 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 CGB3P0DN86 165 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 CGB7P0DN87 165 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 ZNF93P35789 620 aaPredicted RBP13.04□□□□□ -0.32
TSR3-202ENST00000566296 PSMD7P51665 324 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 RAB25P57735 213 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 DIAPH2-AS1Q14236 149 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 RSBN1Q5VWQ0 802 aaPredicted RBP13.04□□□□□ -0.32
TSR3-202ENST00000566296 GLT8D1Q68CQ7 371 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 SLC16A12Q6ZSM3 486 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 LRRTM1Q86UE6 522 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 SATL1Q86VE3 508 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 STPG2Q8N412 459 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 OR10A7Q8NGE5 316 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 RFESDQ8TAC1 157 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 TNFAIP8L1Q8WVP5 186 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 LINC00574Q9H8X3 128 aa13.04□□□□□ -0.32
TSR3-202ENST00000566296 AP4M1O00189 453 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 SSTR5P35346 364 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 PAX5Q02548 391 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 RSU1Q15404 277 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 TEX38Q6PEX7 206 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 MOB3BQ86TA1 216 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 TPRA1Q86W33 373 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 CLVS1Q8IUQ0 354 aaPredicted RBP13.03□□□□□ -0.32
TSR3-202ENST00000566296 BCL7BQ9BQE9 202 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 TENM3Q9P273 2699 aa13.03□□□□□ -0.32
TSR3-202ENST00000566296 CCL24O00175 119 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 RAMP3O60896 148 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 RANBP1P43487 201 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 TMBIM6P55061 237 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 LSM3P62310 102 aaKnown RBP13.02□□□□□ -0.33
TSR3-202ENST00000566296 ZNF816Q0VGE8 651 aaPredicted RBP13.02□□□□□ -0.33
TSR3-202ENST00000566296 PIGYQ3MUY2 71 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 CXorf66Q5JRM2 361 aaPredicted RBP13.02□□□□□ -0.33
TSR3-202ENST00000566296 IZUMO1Q8IYV9 350 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 OR10K1Q8NGX5 313 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 PLPPR1Q8TBJ4 325 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 RAB2BQ8WUD1 216 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 DUX3Q96PT4 197 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 UQCC2Q9BRT2 126 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 COL7A1Q02388 2944 aa13.02□□□□□ -0.33
TSR3-202ENST00000566296 IGHV3-72A0A0B4J1Y9 119 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 IGHV1-3A0A0C4DH29 117 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 A0A1W2PPE3 182 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 NCBP2LA6PVI3 153 aaKnown RBP13.01□□□□□ -0.33
TSR3-202ENST00000566296 NOL3O60936 208 aaKnown RBP13.01□□□□□ -0.33
TSR3-202ENST00000566296 HTR3BO95264 441 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 GAPDHP04406 335 aaKnown RBP13.01□□□□□ -0.33
TSR3-202ENST00000566296 CD37P11049 281 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 RAB3BP20337 219 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 IL3RAP26951 378 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 CTF1Q16619 201 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 PNLIPRP3Q17RR3 467 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 LYPD6Q86Y78 171 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 TGIF2LXQ8IUE1 241 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 OR5M8Q8NGP6 311 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 OR8U1Q8NH10 309 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 DPCDQ9BVM2 203 aaPredicted RBP13.01□□□□□ -0.33
TSR3-202ENST00000566296 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 LIN7CQ9NUP9 197 aaKnown RBP13.01□□□□□ -0.33
TSR3-202ENST00000566296 AK6Q9Y3D8 172 aaKnown RBP13.01□□□□□ -0.33
TSR3-202ENST00000566296 V9GY05 133 aa13.01□□□□□ -0.33
TSR3-202ENST00000566296 SHISA3A0PJX4 238 aa13□□□□□ -0.33
TSR3-202ENST00000566296 TMEM30CPA0ZSE6 113 aa13□□□□□ -0.33
TSR3-202ENST00000566296 OR7C1O76099 320 aaPredicted RBP13□□□□□ -0.33
TSR3-202ENST00000566296 NHLRC4P0CG21 123 aaPredicted RBP13□□□□□ -0.33
TSR3-202ENST00000566296 SDC2P34741 201 aa13□□□□□ -0.33
TSR3-202ENST00000566296 GPR12P47775 334 aa13□□□□□ -0.33
TSR3-202ENST00000566296 REG1BP48304 166 aa13□□□□□ -0.33
TSR3-202ENST00000566296 NCS1P62166 190 aa13□□□□□ -0.33
TSR3-202ENST00000566296 EBI3Q14213 229 aa13□□□□□ -0.33
TSR3-202ENST00000566296 C9orf66Q5T8R8 295 aa13□□□□□ -0.33
TSR3-202ENST00000566296 SUMF2Q8NBJ7 301 aa13□□□□□ -0.33
TSR3-202ENST00000566296 OR6M1Q8NGM8 313 aa13□□□□□ -0.33
TSR3-202ENST00000566296 OR2T10Q8NGZ9 312 aa13□□□□□ -0.33
TSR3-202ENST00000566296 RAX2Q96IS3 184 aa13□□□□□ -0.33
TSR3-202ENST00000566296 EAF1Q96JC9 268 aaPredicted RBP13□□□□□ -0.33
TSR3-202ENST00000566296 S100A13Q99584 98 aa13□□□□□ -0.33
TSR3-202ENST00000566296 NAA50Q9GZZ1 169 aaKnown RBP13□□□□□ -0.33
TSR3-202ENST00000566296 NDUFA13Q9P0J0 144 aa13□□□□□ -0.33
TSR3-202ENST00000566296 TRAV39A0A0B4J263 110 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 CDRT1O95170 752 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 CSTBP04080 98 aaKnown RBP12.99□□□□□ -0.33
TSR3-202ENST00000566296 RPLP1P05386 114 aaKnown RBP12.99□□□□□ -0.33
TSR3-202ENST00000566296 VBP1P61758 197 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 C1orf100Q5SVJ3 147 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 NEK7Q8TDX7 302 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 GFI1Q99684 422 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 METTL9Q9H1A3 318 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 ABCG5Q9H222 651 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms