RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SLC25A12O75746 678 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 HPRT1P00492 218 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 KNG1P01042 644 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 HLA-HP01893 362 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 BGLAPP02818 100 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 CD3DP04234 171 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 IGKV3-11P04433 115 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 IGHV4-34P06331 123 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 PVRP15151 417 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 SELEP16581 610 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 IGFBP3P17936 291 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 PRSS3P35030 304 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 RPL4P36578 427 aaKnown RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 FUT6P51993 359 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 FOXG1P55316 489 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 FZD2Q14332 565 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 RAB35Q15286 201 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 PRSS8Q16651 343 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 MS4A18Q3C1V0 323 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 ALG10Q5BKT4 473 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 MESTQ5EB52 335 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 C1orf100Q5SVJ3 147 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 COL5A1-AS1Q5SY13 56 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 LDLRAD2Q5SZI1 272 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 TMEM200BQ69YZ2 307 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 CRIP3Q6Q6R5 217 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 ZNF474Q6S9Z5 364 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 DHRS13Q6UX07 377 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 ZNF841Q6ZN19 808 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 SLC35E3Q7Z769 313 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 NIT1Q86X76 327 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 LYPD6Q86Y78 171 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 CBLN2Q8IUK8 224 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 APRG1Q8IVJ8 170 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 SPEM1Q8N4L4 309 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 ZDHHC22Q8N966 263 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 POC1AQ8NBT0 407 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 MDS2Q8NDY4 140 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 OR4N2Q8NGD1 307 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 OR4A4PQ8NGN8 299 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 OR1J2Q8NGS2 313 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 OR6K6Q8NGW6 343 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 OTOSQ8NHW6 89 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 ZPLD1Q8TCW7 415 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 RNF128Q8TEB7 428 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 SLC37A2Q8TED4 501 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 TAAR8Q969N4 342 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 APOBEC3DQ96AK3 386 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 C4orf45Q96LM5 186 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 Q96M85 177 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 GUCD1Q96NT3 240 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 KXD1Q9BQD3 176 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 FAAP24Q9BTP7 215 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 FAM60AQ9NP50 221 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 MMP26Q9NRE1 261 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 TMEM100Q9NV29 134 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 AURKAIP1Q9NWT8 199 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 ZNF629Q9UEG4 869 aaPredicted RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 MMP17Q9ULZ9 603 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 ST3GAL6Q9Y274 331 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 DOCK8Q8NF50 2099 aa4.4□□□□□ -1.71
CAPN3-214ENST00000565274 SNRNP200O75643 2136 aaKnown RBP4.4□□□□□ -1.71
CAPN3-214ENST00000565274 TRAV36DV7A0A075B6V5 113 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 TRAV18A0A075B6X5 111 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 TRBV6-7A0A0A0MS04 114 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 IGLV1-36A0A0B4J1U3 117 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 CENPVL3A0A0U1RRI6 287 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 A0A1B0GVT2 93 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 A0A1W2PRD5 423 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 TVP23AA6NH52 213 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 AQP7P3A6NL99 342 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 COLCA2A8K830 154 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 C17orf100A8MU93 164 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 H3BMH7 237 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 DCTN6O00399 190 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 PLPP3O14495 311 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 HCRTR1O43613 425 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 FOXH1O75593 365 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 SEMA4FO95754 770 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 RENP00797 406 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 TYMSP04818 313 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 SFTPBP07988 381 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 OR5H8P0DN80 308 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 TPT1P13693 172 aaKnown RBP4.39□□□□□ -1.71
CAPN3-214ENST00000565274 ABOP16442 354 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 GABRG2P18507 467 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 AZU1P20160 251 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 GATA3P23771 443 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 GRPRP30550 384 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 EFNB2P52799 333 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 CTXN1P60606 82 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 ERVFC1-1P60608 527 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 RPL8P62917 257 aaKnown RBP4.39□□□□□ -1.71
CAPN3-214ENST00000565274 DLK1P80370 383 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 RHOGP84095 191 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 RPL18Q07020 188 aaKnown RBP4.39□□□□□ -1.71
CAPN3-214ENST00000565274 PLCXD2Q0VAA5 305 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 DHRS2Q13268 280 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 MEF2DQ14814 521 aa4.39□□□□□ -1.71
CAPN3-214ENST00000565274 GABRA6Q16445 453 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms