RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 OR6K2Q8NGY2 324 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 CLHC1Q8NHS4 586 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 NT5CQ8TCD5 201 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 DNAJB3Q8WWF6 145 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 MSANTD3Q96H12 275 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 OR2M4Q96R27 311 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 VAT1Q99536 393 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 CIB1Q99828 191 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 SYT4Q9H2B2 425 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 TXNIPQ9H3M7 391 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 STMN3Q9NZ72 180 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 ZNF337Q9Y3M9 751 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 ZNF706Q9Y5V0 76 aaPredicted RBP1.45□□□□□ -2.18
PALB2-203ENST00000565038 ZNF780BQ9Y6R6 833 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 C5orf42Q9H799 3197 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 SIPA1L1O43166 1804 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 PHIPQ8WWQ0 1821 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 NCOR1O75376 2440 aa1.45□□□□□ -2.18
PALB2-203ENST00000565038 MYH2Q9UKX2 1941 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 CCDC171Q6TFL3 1326 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 MYO5AQ9Y4I1 1855 aaKnown RBP1.44□□□□□ -2.18
PALB2-203ENST00000565038 SLC5A10A0PJK1 596 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 A8MWP4 228 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 M0R1B8 84 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 UPK1AO00322 258 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 FFAR1O14842 300 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 APOA1P02647 267 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 RLN2P04090 185 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 LCN1P31025 176 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 GPR4P46093 362 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 RAB25P57735 213 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 DHRS2Q13268 280 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 TNXAQ16473 311 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 CDNFQ49AH0 187 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 ACTBL2Q562R1 376 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 FBXO48Q5FWF7 155 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 SYT6Q5T7P8 510 aaPredicted RBP1.44□□□□□ -2.18
PALB2-203ENST00000565038 RESP18Q5W5W9 173 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 C16orf87Q6PH81 154 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 ZNF773Q6PK81 442 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 CYHR1Q6ZMK1 362 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 Q6ZS52 159 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 NELFCDQ8IXH7 590 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 CA13Q8N1Q1 262 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 SYS1Q8N2H4 156 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 OR8G5Q8NG78 346 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 ZFAND1Q8TCF1 268 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 C2orf15Q8WU43 125 aaKnown RBP1.44□□□□□ -2.18
PALB2-203ENST00000565038 CIDECQ96AQ7 238 aaPredicted RBP1.44□□□□□ -2.18
PALB2-203ENST00000565038 ZNF396Q96N95 335 aaPredicted RBP1.44□□□□□ -2.18
PALB2-203ENST00000565038 GABARAPL1Q9H0R8 117 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 PSTPIP2Q9H939 334 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 TMBIM4Q9HC24 238 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 ACOT13Q9NPJ3 140 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 DDIT4Q9NX09 232 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 ANXA10Q9UJ72 324 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 SLC7A11Q9UPY5 501 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 GINS2Q9Y248 185 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 AP3M1Q9Y2T2 418 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 INSIG2Q9Y5U4 225 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 LAMA5O15230 3695 aa1.44□□□□□ -2.18
PALB2-203ENST00000565038 TRANK1O15050 2925 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 TET1Q8NFU7 2136 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 ABCB11O95342 1321 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 ZFHX4Q86UP3 3567 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 OTOFQ9HC10 1997 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 LTBP2Q14767 1821 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 PSME4Q14997 1843 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 RIF1Q5UIP0 2472 aaKnown RBP1.43□□□□□ -2.18
PALB2-203ENST00000565038 ASPMQ8IZT6 3477 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 ALPK3Q96L96 1907 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 BAZ2BQ9UIF8 2168 aaKnown RBP1.43□□□□□ -2.18
PALB2-203ENST00000565038 EP300Q09472 2414 aaPredicted RBP1.43□□□□□ -2.18
PALB2-203ENST00000565038 LEUTXA8MZ59 168 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 hCG_2039718K7EN88 272 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 K7EPK0 472 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 TCAPO15273 167 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 PSIP1O75475 530 aaKnown RBP1.43□□□□□ -2.18
PALB2-203ENST00000565038 TAC1P20366 129 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 BGNP21810 368 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 XKP51811 444 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 DSTNP60981 165 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 C2orf80Q0P641 193 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 SSX1Q16384 188 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 TMEM31Q5JXX7 168 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 FAHD1Q6P587 224 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 UGT2A3Q6UWM9 527 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 SSX6Q7RTT6 188 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 SETD3Q86TU7 594 aaPredicted RBP1.43□□□□□ -2.18
PALB2-203ENST00000565038 MSRB3Q8IXL7 192 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 ST13P4Q8IZP2 240 aaPredicted RBP1.43□□□□□ -2.18
PALB2-203ENST00000565038 C3orf22Q8N5N4 141 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 Q8NAQ8 132 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 BPIFB6Q8NFQ5 453 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 PPTC7Q8NI37 304 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 DOK4Q8TEW6 326 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 IFT81Q8WYA0 676 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 CATSPER2Q96P56 530 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 RAB1BQ9H0U4 201 aa1.43□□□□□ -2.18
PALB2-203ENST00000565038 CHMP4BQ9H444 224 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms