RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 REG1BP48304 166 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 ABCA11PQ4W5N1 156 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 NKAPLQ5M9Q1 402 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 PRR18Q8N4B5 295 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 DTX3Q8N9I9 347 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 OR10X1Q8NGY0 326 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 OR56B4Q8NH76 319 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 NICN1Q9BSH3 213 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 URM1Q9BTM9 101 aaKnown RBP10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 TRAPPC2LQ9UL33 140 aa10.9□□□□□ -0.66
VPS9D1-204ENST00000565023 TMEM272A0A1B0GTI8 110 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 A0A1W2PRX2 142 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 AIREO43918 545 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 CA11O75493 328 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 LPLP06858 475 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 SNRNP70P08621 437 aaKnown RBP10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 SDC2P34741 201 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 MADCAM1Q13477 382 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 HNF4GQ14541 408 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 CCDC144NLQ6NUI1 221 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 Q8N2B8 174 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 DRAM1Q8N682 238 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 OR13F1Q8NGS4 319 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 AKR1E2Q96JD6 320 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 NEDD4LQ96PU5 975 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 CITED2Q99967 270 aaPredicted RBP10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 LIN7BQ9HAP6 207 aa10.89□□□□□ -0.67
VPS9D1-204ENST00000565023 KMT2CQ8NEZ4 4911 aaKnown RBP10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 IGHV3-72A0A0B4J1Y9 119 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 SMIM30A4D0T7 59 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 FOXI3A8MTJ6 420 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 C15orf65H3BRN8 121 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 OR2F2O95006 317 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 SLC2A2P11168 524 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 GZMHP20718 246 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 BLVRBP30043 206 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 PLA2G7Q13093 441 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 SFXN4Q6P4A7 337 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 NBEAL2Q6ZNJ1 2754 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 C16orf82Q7Z2V1 217 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 C5orf24Q7Z6I8 188 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 MOB3BQ86TA1 216 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 OR10V1Q8NGI7 309 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 CFHR4Q92496 578 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 PTX4Q96A99 478 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 RBM14Q96PK6 669 aaKnown RBP10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 SULT4A1Q9BR01 284 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 OCSTAMPQ9BR26 566 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 MRPS26Q9BYN8 205 aaKnown RBP10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 RAB22AQ9UL26 194 aa10.88□□□□□ -0.67
VPS9D1-204ENST00000565023 PLXNB1O43157 2135 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 A0A0B4J203 849 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 A0A1W2PPI3 338 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 OOSP1A8MZH6 123 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 C12orf77C9JDV5 145 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 HSD17B6O14756 317 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 SLC31A2O15432 143 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 SOCS1O15524 211 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 ORC5O43913 435 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 IGKV1D-33P01593 117 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 IGKV1-33P01594 117 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 CLEC2LP0C7M8 214 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 FAM106CPP0CH98 169 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 TMEM11P17152 192 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 RCC1P18754 421 aaPredicted RBP10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 RAB6AP20340 208 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 TMEM50BP56557 158 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 MXD1Q05195 221 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 C6orf201Q7Z4U5 140 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 CENPVQ7Z7K6 275 aaPredicted RBP10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 OR5AU1Q8NGC0 362 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 OR10A7Q8NGE5 316 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 OR1L1Q8NH94 360 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 R3HDM4Q96D70 268 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 FAAP24Q9BTP7 215 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 FUNDC2Q9BWH2 189 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 GFOD1Q9NXC2 390 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 GNG12Q9UBI6 72 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 HSF4Q9ULV5 492 aa10.87□□□□□ -0.67
VPS9D1-204ENST00000565023 SPINT2O43291 252 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 HBZP02008 142 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 TFAP2AP05549 437 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 ALDH3B2P48448 385 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 VEGFCP49767 419 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 KHDC1LQ5JSQ8 128 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 C6orf183Q5T699 404 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 C10orf99Q6UWK7 81 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 OR56B1Q8NGI3 324 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 MRPL30Q8TCC3 161 aaKnown RBP10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 RBMXL1Q96E39 390 aaKnown RBP10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 WNT10AQ9GZT5 417 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 MBNL3Q9NUK0 354 aaKnown RBP10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 PLEKHJ1Q9NW61 149 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 DAPK2Q9UIK4 370 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 MOB4Q9Y3A3 225 aa10.86□□□□□ -0.67
VPS9D1-204ENST00000565023 RAB27BO00194 218 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 TMEM127O75204 238 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 NAPSAO96009 420 aa10.85□□□□□ -0.67
VPS9D1-204ENST00000565023 GAPDHP04406 335 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms