RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ZNF134P52741 427 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 AQP4P55087 323 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 RPL23AP62750 156 aaKnown RBP13.96□□□□□ -0.17
NME3-205ENST00000563854 EBI3Q14213 229 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 Q3ZCU0 254 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 HSD17B12Q53GQ0 312 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 GLT8D1Q68CQ7 371 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 CEACAM19Q7Z692 300 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 LRRTM1Q86UE6 522 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 STPG2Q8N412 459 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 MS4A15Q8N5U1 240 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 Q8N6K4 173 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 Q8N9W7 124 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 KLHL30-AS1Q8NEE0 82 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 WFDC9Q8NEX5 89 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 OR51D1Q8NGF3 324 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 OR52L2PQ8NGH6 319 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 MRPL30Q8TCC3 161 aaKnown RBP13.96□□□□□ -0.17
NME3-205ENST00000563854 NEDD4LQ96PU5 975 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 RASL11BQ9BPW5 248 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 GHRLQ9UBU3 117 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 TXNL1O43396 289 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 SC5DO75845 299 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 GLAP06280 429 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 UBBP0CG47 229 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 HSMCR30P0CW71 290 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 VSIG8P0DPA2 414 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 CD1BP29016 333 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 PPP1CCP36873 323 aaKnown RBP13.95□□□□□ -0.18
NME3-205ENST00000563854 GP2P55259 537 aaKnown RBP13.95□□□□□ -0.18
NME3-205ENST00000563854 UNQ9370/PRO34162Q6UXP9 181 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 C8orf86Q6ZUL3 223 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 OR2W3Q7Z3T1 314 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 GAPTQ8N292 157 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 UFD1Q92890 307 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 TMEM203Q969S6 136 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 RCC1LQ96I51 464 aaKnown RBP13.95□□□□□ -0.18
NME3-205ENST00000563854 TMEM59Q9BXS4 323 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 ABCG5Q9H222 651 aa13.95□□□□□ -0.18
NME3-205ENST00000563854 CHMP1AQ9HD42 196 aaPredicted RBP13.95□□□□□ -0.18
NME3-205ENST00000563854 LIN7CQ9NUP9 197 aaKnown RBP13.95□□□□□ -0.18
NME3-205ENST00000563854 LSM2Q9Y333 95 aaKnown RBP13.95□□□□□ -0.18
NME3-205ENST00000563854 AP4M1O00189 453 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 LIPKQ5VXJ0 399 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 ETV3LQ6ZN32 361 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 C6orf201Q7Z4U5 140 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 LINC00482Q8N8I6 264 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 SETD6Q8TBK2 473 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 PHYHIPQ92561 330 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 S1PR3Q99500 378 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 SULT4A1Q9BR01 284 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 FAAP24Q9BTP7 215 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 ABHD14AQ9BUJ0 271 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 CCDC90BQ9GZT6 254 aa13.94□□□□□ -0.18
NME3-205ENST00000563854 MBNL3Q9NUK0 354 aaKnown RBP13.94□□□□□ -0.18
NME3-205ENST00000563854 MYF6P23409 242 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 CHATP28329 748 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 HTR2CP28335 458 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 HOXD3P31249 432 aaPredicted RBP13.93□□□□□ -0.18
NME3-205ENST00000563854 ZNF137PP52743 207 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 RPS27AP62979 156 aaKnown RBP13.93□□□□□ -0.18
NME3-205ENST00000563854 MORN2Q502X0 79 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 RNLSQ5VYX0 342 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 LCNL1Q6ZST4 164 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 MRPL41Q8IXM3 137 aaKnown RBP13.93□□□□□ -0.18
NME3-205ENST00000563854 NRG4Q8WWG1 115 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 IL1F10Q8WWZ1 152 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 DUX3Q96PT4 197 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 NICN1Q9BSH3 213 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 JPT1Q9UK76 154 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 TPRKBQ9Y3C4 175 aa13.93□□□□□ -0.18
NME3-205ENST00000563854 LANCL1O43813 399 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 RRP9O43818 475 aaKnown RBP13.92□□□□□ -0.18
NME3-205ENST00000563854 SLC2A2P11168 524 aaPredicted RBP13.92□□□□□ -0.18
NME3-205ENST00000563854 SRMP19623 302 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 THBS3P49746 956 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 F2RL1P55085 397 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 RAB25P57735 213 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 LSAMPQ13449 338 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 P2RY14Q15391 338 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 MMDQ15546 238 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 C1orf100Q5SVJ3 147 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 COMMD1Q8N668 190 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 KCNG3Q8TAE7 436 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 GALMQ96C23 342 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 HSPB9Q9BQS6 159 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 MRPL20Q9BYC9 149 aaKnown RBP13.92□□□□□ -0.18
NME3-205ENST00000563854 PLGRKTQ9HBL7 147 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 PLSCR3Q9NRY6 295 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 ZFP57Q9NU63 452 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 ABRACLQ9P1F3 81 aa13.92□□□□□ -0.18
NME3-205ENST00000563854 RGS10O43665 173 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 RGS11O94810 467 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 DUS4LO95620 317 aaKnown RBP13.91□□□□□ -0.18
NME3-205ENST00000563854 RPLP1P05386 114 aaKnown RBP13.91□□□□□ -0.18
NME3-205ENST00000563854 UCHL1P09936 223 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 SOX6P35712 828 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 RPS25P62851 125 aaKnown RBP13.91□□□□□ -0.18
NME3-205ENST00000563854 UNC119Q13432 240 aa13.91□□□□□ -0.18
NME3-205ENST00000563854 TEX38Q6PEX7 206 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms