RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLK3-207ENST00000562389 ABCB10Q9NRK6 738 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 ABRACLQ9P1F3 81 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 GNG12Q9UBI6 72 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 JPT1Q9UK76 154 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 SPATA2Q9UM82 520 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 CD3GP09693 182 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 GNB3P16520 340 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
CLK3-207ENST00000562389 ARHGDIBP52566 201 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 HLA-DRB3P79483 266 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 MRPS15P82914 257 aaKnown RBP13.48□□□□□ -0.25
CLK3-207ENST00000562389 CTF1Q16619 201 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 PLA1AQ53H76 456 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 GPR107Q5VW38 600 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 FAM53AQ6NSI3 398 aaPredicted RBP13.48□□□□□ -0.25
CLK3-207ENST00000562389 LIAT1Q6ZQX7 453 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 ZNF439Q8NDP4 499 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 SETD6Q8TBK2 473 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 SLC25A38Q96DW6 304 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 OR2S2Q9NQN1 319 aa13.48□□□□□ -0.25
CLK3-207ENST00000562389 A0A1W2PPE3 182 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 CRYBA1P05813 215 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 MADCAM1Q13477 382 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 MORN2Q502X0 79 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 LY6G6FQ5SQ64 297 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 CCDC144NLQ6NUI1 221 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 SLC25A48Q6ZT89 311 aaKnown RBP13.47□□□□□ -0.25
CLK3-207ENST00000562389 C5orf24Q7Z6I8 188 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 OR10V1Q8NGI7 309 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 OR10X1Q8NGY0 326 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 RPEQ96AT9 228 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 OCSTAMPQ9BR26 566 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 C1RLQ9NZP8 487 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 TCF19Q9Y242 345 aa13.47□□□□□ -0.25
CLK3-207ENST00000562389 A0A075B6Q4 140 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 A0A0A6YYH2 397 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 A6NJ64 397 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 YPEL1O60688 119 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 NDUFA7O95182 113 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 FCGR3AP08637 254 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 FOXL1Q12952 345 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 GNMTQ14749 295 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 LY6EQ16553 131 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 STEAP3Q658P3 488 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 DHRS7BQ6IAN0 325 aaPredicted RBP13.46□□□□□ -0.25
CLK3-207ENST00000562389 OR52L2PQ8NGH6 319 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 TOMM40LQ969M1 308 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 KCTD12Q96CX2 325 aaKnown RBP13.46□□□□□ -0.25
CLK3-207ENST00000562389 YPEL2Q96QA6 119 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 RAB18Q9NP72 206 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 COL6A5A8TX70 2615 aa13.46□□□□□ -0.25
CLK3-207ENST00000562389 SLC31A2O15432 143 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 RGS11O94810 467 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 GSTP1P09211 210 aaKnown RBP13.45□□□□□ -0.26
CLK3-207ENST00000562389 IL3RAP26951 378 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 BRS3P32247 399 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 MNDAP41218 407 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 RPL5P46777 297 aaKnown RBP13.45□□□□□ -0.26
CLK3-207ENST00000562389 RAB7AP51149 207 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 RAB13P51153 203 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 ZNF134P52741 427 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 RELBQ01201 579 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 ZNF816Q0VGE8 651 aaPredicted RBP13.45□□□□□ -0.26
CLK3-207ENST00000562389 ZNF260Q3ZCT1 412 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 CDNFQ49AH0 187 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 CT45A1Q5HYN5 189 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 CT45A3Q8NHU0 189 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 IL1F10Q8WWZ1 152 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 PHF21AQ96BD5 680 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 PITPNC1Q9UKF7 332 aa13.45□□□□□ -0.26
CLK3-207ENST00000562389 A0A1W2PPI3 338 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 A6NDX4 124 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 TRDCB7Z8K6 153 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 HSD17B6O14756 317 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 PPP1CCP36873 323 aaKnown RBP13.44□□□□□ -0.26
CLK3-207ENST00000562389 ZNF137PP52743 207 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 ARFRP1Q13795 201 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 SRSF7Q16629 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLK3-207ENST00000562389 AWAT1Q58HT5 328 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 UBE2NLQ5JXB2 153 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 HACD4Q5VWC8 232 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 CCBE1Q6UXH8 406 aaPredicted RBP13.44□□□□□ -0.26
CLK3-207ENST00000562389 OR8H3Q8N146 312 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 TAF15Q92804 592 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLK3-207ENST00000562389 ABHD14AQ9BUJ0 271 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 ABCG5Q9H222 651 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 DNHD1Q96M86 4753 aa13.44□□□□□ -0.26
CLK3-207ENST00000562389 CHST1O43916 411 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 SCTP09683 121 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 DTYMKP23919 212 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 TALDO1P37837 337 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 KIR2DS4P43632 304 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 RORCP51449 518 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 RAG2P55895 527 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 PITPNAQ00169 270 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 DIAPH2-AS1Q14236 149 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 KIR2DS1Q14954 304 aa13.43□□□□□ -0.26
CLK3-207ENST00000562389 PNLIPRP3Q17RR3 467 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms