RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 GHRLQ9UBU3 117 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 LSM2Q9Y333 95 aaKnown RBP8.13□□□□□ -1.11
CLK3-205ENST00000561673 DNAH9Q9NYC9 4486 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 PDCD6O75340 191 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 CA11O75493 328 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 MOSP00540 346 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 SRMP19623 302 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 IL3RAP26951 378 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 CD1BP29016 333 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 ZNF137PP52743 207 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 AQP4P55087 323 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 SPHARQ15513 63 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 OR10K2Q6IF99 312 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 TRAT1Q6PIZ9 186 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 CEACAM19Q7Z692 300 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 SLC35E3Q7Z769 313 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 TGIF2LXQ8IUE1 241 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 IZUMO1Q8IYV9 350 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 Q8N9W7 124 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 OR2T10Q8NGZ9 312 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 MRPL30Q8TCC3 161 aaKnown RBP8.12□□□□□ -1.11
CLK3-205ENST00000561673 TAF9BQ9HBM6 251 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 RAB9BQ9NP90 201 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 OR2S2Q9NQN1 319 aa8.12□□□□□ -1.11
CLK3-205ENST00000561673 MBNL3Q9NUK0 354 aaKnown RBP8.12□□□□□ -1.11
CLK3-205ENST00000561673 AURKAIP1Q9NWT8 199 aaPredicted RBP8.12□□□□□ -1.11
CLK3-205ENST00000561673 MPIG6BO95866 241 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 UBBP0CG47 229 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 VSIG8P0DPA2 414 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 CD37P11049 281 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 F2RL1P55085 397 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 RPL23AP62750 156 aaKnown RBP8.11□□□□□ -1.11
CLK3-205ENST00000561673 SLC35A2P78381 396 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 IRF3Q14653 427 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 GNMTQ14749 295 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 MED22Q15528 200 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 TMEM30BQ3MIR4 351 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 MORN2Q502X0 79 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 RBM48Q5RL73 367 aaKnown RBP8.11□□□□□ -1.11
CLK3-205ENST00000561673 C1orf100Q5SVJ3 147 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 LIPKQ5VXJ0 399 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 STEAP3Q658P3 488 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 GLT8D1Q68CQ7 371 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 C18orf65Q6ZTR6 163 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 STPG2Q8N412 459 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 OR52L2PQ8NGH6 319 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 MRAPQ8TCY5 172 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 PHYHIPQ92561 330 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 S1PR3Q99500 378 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 SULT4A1Q9BR01 284 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 FAAP24Q9BTP7 215 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 CST11Q9H112 138 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 ABCG5Q9H222 651 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 SCN3BQ9NY72 215 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 KCNIP1Q9NZI2 227 aa8.11□□□□□ -1.11
CLK3-205ENST00000561673 SLC22A1O15245 554 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 TXNL1O43396 289 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 UCHL1P09936 223 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 CHATP28329 748 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 HTR2CP28335 458 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 PPP1CCP36873 323 aaKnown RBP8.1□□□□□ -1.11
CLK3-205ENST00000561673 GPR12P47775 334 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 RPS27AP62979 156 aaKnown RBP8.1□□□□□ -1.11
CLK3-205ENST00000561673 SLC35B1P78383 322 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 QRFPP83859 136 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 HTD2P86397 168 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 UNC119Q13432 240 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 HSD17B12Q53GQ0 312 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 ETV3LQ6ZN32 361 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 TMEM91Q6ZNR0 172 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 OR2W3Q7Z3T1 314 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 C6orf201Q7Z4U5 140 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 ZNF554Q86TJ5 538 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 FOXRED2Q8IWF2 684 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 MRPL41Q8IXM3 137 aaKnown RBP8.1□□□□□ -1.11
CLK3-205ENST00000561673 ODF3L1Q8IXM7 274 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 LINC00482Q8N8I6 264 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 KCNG3Q8TAE7 436 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 UFD1Q92890 307 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 TMEM203Q969S6 136 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
CLK3-205ENST00000561673 NEDD4LQ96PU5 975 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 KCNK15Q9H427 330 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 ZFP57Q9NU63 452 aa8.1□□□□□ -1.11
CLK3-205ENST00000561673 LIN7CQ9NUP9 197 aaKnown RBP8.1□□□□□ -1.11
CLK3-205ENST00000561673 TMEM14DPA8MWL7 114 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 AP4M1O00189 453 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 LANCL1O43813 399 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 HSMCR30P0CW71 290 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 MYF6P23409 242 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 THBS3P49746 956 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 KRTAP10-11P60412 298 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 PNLIPRP3Q17RR3 467 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 TEX38Q6PEX7 206 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 FAM71E2Q8N5Q1 922 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 COMMD1Q8N668 190 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 OR51D1Q8NGF3 324 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 OR8H1Q8NGG4 311 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms