RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MADCAM1Q13477 382 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 CT45A1Q5HYN5 189 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 SLC25A48Q6ZT89 311 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 Q6ZTK2 550 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 CT45A3Q8NHU0 189 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 CFHR4Q92496 578 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 PTX4Q96A99 478 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 OCSTAMPQ9BR26 566 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 RAB18Q9NP72 206 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 TRRAPQ9Y4A5 3859 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 AMMECR1Q9Y4X0 333 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 RNF114Q9Y508 228 aa12.24□□□□□ -0.45
SNRPA1-213ENST00000560856 HTD2P86397 168 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 SRSF4Q08170 494 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 GNMTQ14749 295 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 MORN2Q502X0 79 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 LY6G6FQ5SQ64 297 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 SFXN4Q6P4A7 337 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 SHISA2Q6UWI4 295 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 PRR18Q8N4B5 295 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 OR52L2PQ8NGH6 319 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 OR10V1Q8NGI7 309 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 TOMM40LQ969M1 308 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 RPEQ96AT9 228 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 ZNF702PQ9H963 129 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 RAB9BQ9NP90 201 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 KCNIP1Q9NZI2 227 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 PITPNC1Q9UKF7 332 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 SIGLEC9Q9Y336 463 aa12.23□□□□□ -0.45
SNRPA1-213ENST00000560856 MFNGO00587 321 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 TIMM23O14925 209 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 BRS3P32247 399 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 TGFBR1P36897 503 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 ZNF137PP52743 207 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 MXD1Q05195 221 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 ZNF816Q0VGE8 651 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 HABP2Q14520 560 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 STEAP3Q658P3 488 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 CCDC144NLQ6NUI1 221 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 Q6ZS46 218 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 THNSL2Q86YJ6 484 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 OR8H3Q8N146 312 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 Q8N2B8 174 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 OR10X1Q8NGY0 326 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 Q9N2K0 584 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 VCX3AQ9NNX9 186 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 DAPK2Q9UIK4 370 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 JPT1Q9UK76 154 aa12.22□□□□□ -0.45
SNRPA1-213ENST00000560856 YPEL1O60688 119 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 SNRPBP14678 240 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 PPP1CCP36873 323 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 RAB7AP51149 207 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 BLCAPP62952 87 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 MOB1BQ7L9L4 216 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 DRAM1Q8N682 238 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 RAB3CQ96E17 227 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 YPEL2Q96QA6 119 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 CMSS1Q9BQ75 279 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 NPFFR1Q9GZQ6 430 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 C12orf4Q9NQ89 552 aa12.21□□□□□ -0.45
SNRPA1-213ENST00000560856 HAX1O00165 279 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 HSD17B6O14756 317 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 AIREO43918 545 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 GAPDHP04406 335 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 AMY1AP04745 511 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 AMY2AP04746 511 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 HIST1H1DP16402 221 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 GNB3P16520 340 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 MNDAP41218 407 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 EBI3Q14213 229 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 TIMM50Q3ZCQ8 353 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 ODF3L1Q8IXM7 274 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 OR13F1Q8NGS4 319 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 OR5H6Q8NGV6 325 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 OR56B4Q8NH76 319 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 LGALS14Q8TCE9 139 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 GALMQ96C23 342 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 RBM14Q96PK6 669 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 CITED1Q99966 193 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 CHMP1AQ9HD42 196 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 SERTAD4Q9NUC0 356 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 WNK1Q9H4A3 2382 aa12.2□□□□□ -0.46
SNRPA1-213ENST00000560856 FBN3Q75N90 2809 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 IGHV1-3A0A0C4DH29 117 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 IGKV1-6A0A0C4DH72 117 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 METTL21EPA6NDL7 271 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 OR2F2O95006 317 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 SNRNP70P08621 437 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 SCTP09683 121 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 REG1BP48304 166 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 ARHGDIBP52566 201 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 HLA-DRB3P79483 266 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 C16orf82Q7Z2V1 217 aa12.19□□□□□ -0.46
SNRPA1-213ENST00000560856 SETD6Q8TBK2 473 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms