RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 DTYMKP23919 212 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 IL3RAP26951 378 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 KIR2DS4P43632 304 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 RORCP51449 518 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 TMBIM6P55061 237 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 ACTG1P63261 375 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 HLA-DRB3P79483 266 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 SRSF2Q01130 221 aaKnown RBP10.51□□□□□ -0.73
NEDD8-208ENST00000560427 KIR2DS1Q14954 304 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
NEDD8-208ENST00000560427 PNLIPRP3Q17RR3 467 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 UBE2NLQ5JXB2 153 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 TPTE2P1Q5T6R2 138 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 HACD4Q5VWC8 232 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 Q6ZS49 121 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 PRR18Q8N4B5 295 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.51□□□□□ -0.73
NEDD8-208ENST00000560427 OR10X1Q8NGY0 326 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 OR1L1Q8NH94 360 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 SETD6Q8TBK2 473 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 SLC25A38Q96DW6 304 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 CYYR1Q96J86 154 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 DUX5Q96PT3 197 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 YPEL2Q96QA6 119 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 SSX3Q99909 188 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 ABCG5Q9H222 651 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 RAB18Q9NP72 206 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 ABCB10Q9NRK6 738 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 PITPNC1Q9UKF7 332 aa10.51□□□□□ -0.73
NEDD8-208ENST00000560427 NOL3O60936 208 aaKnown RBP10.5□□□□□ -0.73
NEDD8-208ENST00000560427 CRYBA1P05813 215 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 FCGR3AP08637 254 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 HKR1P10072 659 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 BRS3P32247 399 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 TALDO1P37837 337 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 MNDAP41218 407 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 GNG10P50151 68 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 RAB7AP51149 207 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 ZNF137PP52743 207 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 ARFRP1Q13795 201 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 MORN2Q502X0 79 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 KIAA2026Q5HYC2 2103 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 Q6ZPA2 131 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 SLC25A48Q6ZT89 311 aaKnown RBP10.5□□□□□ -0.73
NEDD8-208ENST00000560427 OR8H3Q8N146 312 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 ZNF439Q8NDP4 499 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 OR5H6Q8NGV6 325 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 LEAP2Q969E1 77 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 TOMM40LQ969M1 308 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 RPEQ96AT9 228 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 MDFIQ99750 246 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 HDHD3Q9BSH5 251 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-208ENST00000560427 DCSTAMPQ9H295 470 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 DIABLOQ9NR28 239 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 HILPDAQ9Y5L2 63 aa10.5□□□□□ -0.73
NEDD8-208ENST00000560427 IGHV3-43A0A0B4J1X8 118 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 TMEM89A2RUT3 159 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 TRDCB7Z8K6 153 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 ITGB1BP1O14713 200 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 TXNL1O43396 289 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 GPR137BO60478 399 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 LPLP06858 475 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 IGHV3-43DP0DP04 118 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 ZBTB25P24278 435 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 COMPP49747 757 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-208ENST00000560427 ZNF816Q0VGE8 651 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-208ENST00000560427 FOXL1Q12952 345 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 ZNF260Q3ZCT1 412 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 CDNFQ49AH0 187 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 UTF1Q5T230 341 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 OLFML2AQ68BL7 652 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 CLVS1Q8IUQ0 354 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-208ENST00000560427 DTX3Q8N9I9 347 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 OR4A4PQ8NGN8 299 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 UBALD1Q8TB05 177 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 S100A16Q96FQ6 103 aaKnown RBP10.49□□□□□ -0.73
NEDD8-208ENST00000560427 ABHD14AQ9BUJ0 271 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 TCF19Q9Y242 345 aa10.49□□□□□ -0.73
NEDD8-208ENST00000560427 COL6A5A8TX70 2615 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 A0A075B6Q4 140 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 FABP7O15540 132 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 XRCC3O43542 346 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 NDUFA7O95182 113 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 ZNF182P17025 639 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-208ENST00000560427 SOX6P35712 828 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 GNG2P59768 71 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 DHRS7BQ6IAN0 325 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-208ENST00000560427 MZT2AQ6P582 158 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 C16orf82Q7Z2V1 217 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 SAMD12Q8N8I0 201 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 OR2AK2Q8NG84 335 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 OR52L2PQ8NGH6 319 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 OR10V1Q8NGI7 309 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 SPATA3Q8NHX4 192 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 PIFOQ8TCI5 191 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 IL1F10Q8WWZ1 152 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 EDARADDQ8WWZ3 215 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms