RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 MRPS10P82664 201 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 MADCAM1Q13477 382 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 SPCS2Q15005 226 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 HLA-DRB5Q30154 266 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 Q6YL49 198 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 LIAT1Q6ZQX7 453 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 RFESDQ8TAC1 157 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 SLC6A7Q99884 636 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 RBM38Q9H0Z9 239 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 MMP27Q9H306 513 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 AUNIPQ9H7T9 357 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 SCPEP1Q9HB40 452 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 PITPNC1Q9UKF7 332 aa9.81□□□□□ -0.84
RABGGTA-215ENST00000560207 VGLL3A8MV65 326 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 BUB1B-PAK6H3BSN5 160 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 RGS5O15539 181 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 HSPA12AO43301 675 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 OMGP23515 440 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 PRSS3P35030 304 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 PLA2G7Q13093 441 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 BAMBIQ13145 260 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 KLRD1Q13241 179 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 OR2AK2Q8NG84 335 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 OR10X1Q8NGY0 326 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 TOLLIPQ9H0E2 274 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 RAB18Q9NP72 206 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 BATF3Q9NR55 127 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 ZNRD1Q9P1U0 126 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 PSG11Q9UQ72 335 aa9.8□□□□□ -0.84
RABGGTA-215ENST00000560207 IGHV3OR16-10A0A075B7F0 116 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 A0A0U1RQK1 487 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 TMEM235A6NFC5 223 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 FAM25AB3EWG3 89 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 FAM25CB3EWG5 89 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 FAM25GB3EWG6 89 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 FABP7O15540 132 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 MMP23AO75900 390 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 S100A5P33763 92 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 DEFB112Q30KQ8 113 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 MORN2Q502X0 79 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 RUSC1-AS1Q66K80 236 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 FAM71F2Q6NXP2 309 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 CNIH2Q6PI25 160 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 SLC25A48Q6ZT89 311 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 PDZD9Q8IXQ8 264 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 OR8H3Q8N146 312 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 PRR18Q8N4B5 295 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 SIGLECL1Q8N7X8 197 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 OR4P4Q8NGL7 312 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 OR10J5Q8NHC4 309 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 MCFD2Q8NI22 146 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 IL1F10Q8WWZ1 152 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 ABCB10Q9NRK6 738 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 PIPOXQ9P0Z9 390 aa9.79□□□□□ -0.84
RABGGTA-215ENST00000560207 JMJD1CQ15652 2540 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 MEX3AA1L020 520 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 HPGDSO60760 199 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 SLC22A5O76082 557 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 GAPDHP04406 335 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 ELK1P19419 428 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 IER3P46695 156 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 ZNF137PP52743 207 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 TAS2R20P59543 309 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 SSBP1Q04837 148 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 LRRC75BQ2VPJ9 315 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 PLA1AQ53H76 456 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 BCL6BQ8N143 479 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 OR1L1Q8NH94 360 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 C22orf15Q8WYQ4 148 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 RPEQ96AT9 228 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 CABLES2Q9BTV7 478 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 SLIRPQ9GZT3 109 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 NXF2Q9GZY0 626 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 SLC23A1Q9UHI7 598 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 ANXA10Q9UJ72 324 aa9.78□□□□□ -0.84
RABGGTA-215ENST00000560207 TRBV6-7A0A0A0MS04 114 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 TRAV39A0A0B4J263 110 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 EIF4EP06730 217 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 RNASE1P07998 156 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 PTBP1P26599 531 aaKnown RBP eCLIP9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 GDNFP39905 211 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 CEACAM6P40199 344 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 ACTBP60709 375 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 ACTG1P63261 375 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 ZNF816Q0VGE8 651 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 SSX2Q16385 188 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 LTC4SQ16873 150 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 OLFML2AQ68BL7 652 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 C16orf82Q7Z2V1 217 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 HOGA1Q86XE5 327 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 ZNF439Q8NDP4 499 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 BEST4Q8NFU0 473 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 TMEM158Q8WZ71 300 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 BORCS5Q969J3 196 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 TOMM40LQ969M1 308 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 AKR1E2Q96JD6 320 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 S1PR3Q99500 378 aa9.77□□□□□ -0.85
RABGGTA-215ENST00000560207 GINS4Q9BRT9 223 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms