RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 TINAGL1Q9GZM7 467 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF696Q9H7X3 374 aa4.83□□□□□ -1.64
CTDSPL2-204ENST00000558966 ABCB10Q9NRK6 738 aa4.83□□□□□ -1.64
CTDSPL2-204ENST00000558966 IDI2-AS1Q9NZ38 188 aa4.83□□□□□ -1.64
CTDSPL2-204ENST00000558966 DPM3Q9P2X0 92 aa4.83□□□□□ -1.64
CTDSPL2-204ENST00000558966 TMEM30CPA0ZSE6 113 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A10PA6NDY2 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A18PA6NE21 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A16PA6NEW6 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A7PA6NKC0 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A22PA8MWA6 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A12PA8MX19 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A5PA8MXJ8 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A23PA8MXZ1 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 LY6LH3BQJ8 138 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 BUB1B-PAK6H3BSN5 160 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 SLC22A1O15245 554 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 MT-ND4P03905 459 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A15PP0C7V4 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A13PP0C7W8 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A14PP0C7W9 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A24PP0C7X0 464 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 KIR2DS4P43632 304 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 PTTG1IPP53801 180 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FABP5Q01469 135 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 UNC119Q13432 240 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 RAB32Q13637 225 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 RBM39Q14498 530 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 SSX1Q16384 188 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 LTC4SQ16873 150 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 TPTE2P1Q5T6R2 138 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 GLT8D1Q68CQ7 371 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR10K2Q6IF99 312 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 RAB12Q6IQ22 244 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM53AQ6NSI3 398 aaPredicted RBP4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF367Q7RTV3 350 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 GAPTQ8N292 157 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR4C13Q8NGP0 309 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR9G1Q8NH87 305 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 UBALD1Q8TB05 177 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 NEK7Q8TDX7 302 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 CCDC107Q8WV48 283 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 NPFFR1Q9GZQ6 430 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 MMP28Q9H239 520 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 RANBP3Q9H6Z4 567 aaPredicted RBP4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF702PQ9H963 129 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 SPACA1Q9HBV2 294 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 RAB18Q9NP72 206 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 ACOT13Q9NPJ3 140 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 GHRLQ9UBU3 117 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 PITPNC1Q9UKF7 332 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 BLOC1S6Q9UL45 172 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 PSG11Q9UQ72 335 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 PEX16Q9Y5Y5 336 aa4.82□□□□□ -1.64
CTDSPL2-204ENST00000558966 TMEM14DPA8MWL7 114 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 LEUTXA8MZ59 168 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 C12orf77C9JDV5 145 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 MCRIP1C9JLW8 97 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 J3QR06 171 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 AIPO00170 330 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 TOR1AO14656 332 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 PDCD6O75340 191 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 UBBP0CG47 229 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 FUT3P21217 361 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 CD24P25063 80 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 PSMA1P25786 263 aaKnown RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 HTR2CP28335 458 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 GNG10P50151 68 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 GABARAPL2P60520 117 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 QRFPP83859 136 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 EMX1Q04741 257 aaPredicted RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 TRAM1Q15629 374 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 Q8N2B8 174 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR10A7Q8NGE5 316 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR6M1Q8NGM8 313 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR4K15Q8NH41 348 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 ST8SIA2Q92186 375 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 ARL11Q969Q4 196 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 NICN1Q9BSH3 213 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 CST11Q9H112 138 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 SERTAD4Q9NUC0 356 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 ETAA1Q9NY74 926 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 TET2Q6N021 2002 aaPredicted RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 A0A087WWL8 130 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 A0A0A6YYD4 124 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 IGHV3-43A0A0B4J1X8 118 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 A0A1W2PPE3 182 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 A0A1W2PPI3 338 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 OOSP1A8MZH6 123 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 DENRO43583 198 aaKnown RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 ORC5O43913 435 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 ARL6IP5O75915 188 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 GLAP06280 429 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 IGHV3-43DP0DP04 118 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 GZMHP20718 246 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 CALRP27797 417 aaKnown RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 CHATP28329 748 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 CEACAM3P40198 252 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 PRRX1P54821 245 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms