RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SOCS1O15524 211 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 FBXO24O75426 580 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 ARL6IP5O75915 188 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 UBBP0CG47 229 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 PPP1CCP36873 323 aaKnown RBP9.59□□□□□ -0.87
TPM1-216ENST00000558910 VEGFCP49767 419 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 OR10A3P58181 314 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 EMX1Q04741 257 aaPredicted RBP9.59□□□□□ -0.87
TPM1-216ENST00000558910 PLA2G7Q13093 441 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 KHDC1LQ5JSQ8 128 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 C1orf100Q5SVJ3 147 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 C6orf183Q5T699 404 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 C22orf42Q6IC83 251 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 CCDC144NLQ6NUI1 221 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 OR6M1Q8NGM8 313 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 KCNG3Q8TAE7 436 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 MRPL30Q8TCC3 161 aaKnown RBP9.59□□□□□ -0.87
TPM1-216ENST00000558910 CREB3L1Q96BA8 519 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 MRPS24Q96EL2 167 aaKnown RBP9.59□□□□□ -0.87
TPM1-216ENST00000558910 Q9H521 79 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 RANBP3Q9H6Z4 567 aaPredicted RBP9.59□□□□□ -0.87
TPM1-216ENST00000558910 ISYNA1Q9NPH2 558 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 OR2S2Q9NQN1 319 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 SERTAD4Q9NUC0 356 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 PLEKHJ1Q9NW61 149 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 LINC00527Q9UJ94 153 aa9.59□□□□□ -0.87
TPM1-216ENST00000558910 RRP15Q9Y3B9 282 aaKnown RBP9.59□□□□□ -0.87
TPM1-216ENST00000558910 MEGF8Q7Z7M0 2845 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 A0A1W2PPI3 338 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
TPM1-216ENST00000558910 ZNF736B4DX44 427 aaPredicted RBP9.58□□□□□ -0.88
TPM1-216ENST00000558910 SLC22A1O15245 554 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 SC5DO75845 299 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 BPNT1O95861 308 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 FAM106CPP0CH98 169 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 CHATP28329 748 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 DYNLT3P51808 116 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 LOXL3P58215 753 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 TRAM1Q15629 374 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 TBCEQ15813 527 aaPredicted RBP9.58□□□□□ -0.88
TPM1-216ENST00000558910 C2orf68Q2NKX9 166 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 C10orf99Q6UWK7 81 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 CENPVQ7Z7K6 275 aaPredicted RBP9.58□□□□□ -0.88
TPM1-216ENST00000558910 AKR1E2Q96JD6 320 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 RBM14Q96PK6 669 aaKnown RBP9.58□□□□□ -0.88
TPM1-216ENST00000558910 NCOR1P1Q9H4R4 102 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 GHRLQ9UBU3 117 aa9.58□□□□□ -0.88
TPM1-216ENST00000558910 TET2Q6N021 2002 aaPredicted RBP9.57□□□□□ -0.88
TPM1-216ENST00000558910 IGHV1-3A0A0C4DH29 117 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 TMEM14DPA8MWL7 114 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 SLC17A2O00624 439 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 ORC5O43913 435 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 OR2F2O95006 317 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 GAPDHP04406 335 aaKnown RBP9.57□□□□□ -0.88
TPM1-216ENST00000558910 MYL9P24844 172 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 IL3RAP26951 378 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 ZNF134P52741 427 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 DEFA6Q01524 100 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 C2orf76Q3KRA6 126 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 SPARTQ8N0X7 666 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 OR5AU1Q8NGC0 362 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 OR10A7Q8NGE5 316 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 FAM3DQ96BQ1 224 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 CITED2Q99967 270 aaPredicted RBP9.57□□□□□ -0.88
TPM1-216ENST00000558910 URM1Q9BTM9 101 aaKnown RBP9.57□□□□□ -0.88
TPM1-216ENST00000558910 LPAR5Q9H1C0 372 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 AK3Q9UIJ7 227 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 V9GY05 133 aa9.57□□□□□ -0.88
TPM1-216ENST00000558910 TMEM272A0A1B0GTI8 110 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A10PA6NDY2 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A18PA6NE21 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A16PA6NEW6 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A20PA6NIJ5 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A7PA6NKC0 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A12PA8MX19 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A5PA8MXJ8 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A23PA8MXZ1 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 KCNAB3O43448 404 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A15PP0C7V4 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A13PP0C7W8 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A14PP0C7W9 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A24PP0C7X0 464 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 SLC2A2P11168 524 aaPredicted RBP9.56□□□□□ -0.88
TPM1-216ENST00000558910 PSMA1P25786 263 aaKnown RBP9.56□□□□□ -0.88
TPM1-216ENST00000558910 RAB7AP51149 207 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 GABARAPL2P60520 117 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 QRFPP83859 136 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 PAX5Q02548 391 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 NEDD8Q15843 81 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 CT45A1Q5HYN5 189 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 TGIF2LXQ8IUE1 241 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 CT45A3Q8NHU0 189 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 CFHR4Q92496 578 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 R3HDM4Q96D70 268 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 ARHGAP5-AS1Q96IT6 56 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 NOL4LQ96MY1 436 aaPredicted RBP9.56□□□□□ -0.88
TPM1-216ENST00000558910 MMP27Q9H306 513 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 LINC00574Q9H8X3 128 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 ABRACLQ9P1F3 81 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms