RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 UTRNP46939 3433 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 FREM3P0C091 2139 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 CEP192Q8TEP8 1941 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 TDRD6O60522 2096 aaKnown RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 ATG2BQ96BY7 2078 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 OR5B21A6NL26 309 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 FOXI3A8MTJ6 420 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 PRR33A8MZF0 331 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 FAM157AC9JC47 383 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 H3BSH0 61 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 AQP7O14520 342 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 SOCS1O15524 211 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 PDE6DO43924 150 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 PRH1P02810 166 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 DANCRP0C864 163 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 TRGC1P0CF51 173 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 ESDP10768 282 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 SLC25A6P12236 298 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 SELEP16581 610 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 FAHP16930 419 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 OR3A4PP47883 348 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 GLIPR1P48060 266 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 CLDN17P56750 224 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 FOXL2P58012 376 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 RND3P61587 244 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 RPS23P62266 143 aaKnown RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 RPL23AP62750 156 aaKnown RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 RAB32Q13637 225 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 MPV17LQ2QL34 196 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 CEACAM21Q3KPI0 293 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 SOHLH1Q5JUK2 328 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 LDLRAD2Q5SZI1 272 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 AADACL3Q5VUY0 350 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 SHISA2Q6UWI4 295 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 C6orf15Q6UXA7 325 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 LIAT1Q6ZQX7 453 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 LINC00696Q6ZRV3 163 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 YRDCQ86U90 279 aaKnown RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 CMTM1Q8IZ96 169 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 OSR2Q8N2R0 312 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 PIGTQ969N2 578 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 PINX1Q96BK5 328 aaKnown RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 C1orf147Q96MC9 270 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 CITED1Q99966 193 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 PSMG3Q9BT73 122 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 RTN4RQ9BZR6 473 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 KCNK15Q9H427 330 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 SRD5A3Q9H8P0 318 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 GPR35Q9HC97 309 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 NGBQ9NPG2 151 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 PNRC2Q9NPJ4 139 aaKnown RBP4.76□□□□□ -1.65
GABPB1-207ENST00000558335 OR2S2Q9NQN1 319 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 TMEM38BQ9NVV0 291 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 MYO7AQ13402 2215 aa4.76□□□□□ -1.65
GABPB1-207ENST00000558335 A0A087WV48 116 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 NSG1A0A0A6YYJ2 146 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TRAV25A0A0B4J276 109 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TRBV7-9A0A0J9YWB2 115 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF816-ZNF321PA0A0X1KG74 233 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 A0A1B0GW15 77 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 OR2W5A6NFC9 320 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 A6NNC1 897 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 LRP3O75074 770 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 PDCD6O75340 191 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 PITX3O75364 302 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TIAF1O95411 115 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 NRASP01111 189 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 IFNA1P01562 189 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 P04436 131 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 HPNP05981 417 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 OR8U9P0C7N5 309 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 LIFP15018 202 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 FUT3P21217 361 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TUBG1P23258 451 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 SRD5A2P31213 254 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 LTBRP36941 435 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 RAB9AP51151 201 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 RND2P52198 227 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TMEM50BP56557 158 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 UBE2NP61088 152 aaKnown RBP4.75□□□□□ -1.65
GABPB1-207ENST00000558335 SUPT4H1P63272 117 aaKnown RBP4.75□□□□□ -1.65
GABPB1-207ENST00000558335 AESQ08117 197 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 SRSF6Q13247 344 aaKnown RBP4.75□□□□□ -1.65
GABPB1-207ENST00000558335 ELOBQ15370 118 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 MST1LQ2TV78 715 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 ANKRD55Q3KP44 614 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 ACSF3Q4G176 576 aaPredicted RBP4.75□□□□□ -1.65
GABPB1-207ENST00000558335 OR4A47Q6IF82 309 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TEX38Q6PEX7 206 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TOMM20LQ6UXN7 152 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 Q6ZRG5 221 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 GTF2H5Q6ZYL4 71 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 MKXQ8IYA7 352 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 BMPERQ8N8U9 685 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 NHLRC2Q8NBF2 726 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 OR10S1Q8NGN2 331 aa4.75□□□□□ -1.65
GABPB1-207ENST00000558335 OR10G4Q8NGN3 311 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms