RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GNG10P50151 68 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 UBE2E1P51965 193 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 DGCR2P98153 550 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 HOGA1Q86XE5 327 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 OR10A7Q8NGE5 316 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 OR13D1Q8NGV5 346 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 PTTG2Q9NZH5 202 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 KLK11Q9UBX7 282 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 ZNF69Q9UC07 566 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 PSG11Q9UQ72 335 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 A0A087X0M5 115 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 A0A1B0GX30 115 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 KIR2DS4P43632 304 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 KIR2DS1Q14954 304 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 SRSF7Q16629 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
NEDD1-213ENST00000557644 PYHIN1Q6K0P9 492 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 Q6ZS49 121 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 BCL6BQ8N143 479 aaPredicted RBP12.44□□□□□ -0.42
NEDD1-213ENST00000557644 BEST4Q8NFU0 473 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 C17orf50Q8WW18 174 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 CLEC7AQ9BXN2 247 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 PARP12Q9H0J9 701 aaKnown RBP12.44□□□□□ -0.42
NEDD1-213ENST00000557644 IFT46Q9NQC8 304 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 CDC42EP3Q9UKI2 254 aa12.44□□□□□ -0.42
NEDD1-213ENST00000557644 BET1O15155 118 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 ARG1P05089 322 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 HTD2P86397 168 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 LDLRAD2Q5SZI1 272 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 OR11H6Q8NGC7 330 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 OR4A4PQ8NGN8 299 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 SLC31A2O15432 143 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 PAX6P26367 422 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 ZNF134P52741 427 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 ZNF79Q15937 498 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 SCPEP1Q9HB40 452 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 RAB9BQ9NP90 201 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 ANXA10Q9UJ72 324 aa12.43□□□□□ -0.42
NEDD1-213ENST00000557644 ODF3BA8MYP8 253 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 NPFFO15130 113 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 TPPPO94811 219 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 CD34P28906 385 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 SAA4P35542 130 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 CBX5P45973 191 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 CHRFAM7AQ494W8 412 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 MORN2Q502X0 79 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 ZNF626Q68DY1 528 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 LHFPL4Q7Z7J7 247 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 JPT1Q9UK76 154 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 ANAPC10Q9UM13 185 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 HSPA12AO43301 675 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 SRD5A1P18405 259 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 ETV6P41212 452 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 FCAMRQ8WWV6 532 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 CABLES2Q9BTV7 478 aa12.42□□□□□ -0.42
NEDD1-213ENST00000557644 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 J3QR06 171 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 SULT1C2O00338 296 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 IGLV1-47P01700 117 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 EPHA1P21709 976 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 HLA-DMAP28067 261 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 CEACAM6P40199 344 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 LYSMD2Q8IV50 215 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 OR4P4Q8NGL7 312 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 OR9G1Q8NH87 305 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 C15orf40Q8WUR7 153 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 SMIM4Q8WVI0 70 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 MS4A7Q9GZW8 240 aaPredicted RBP12.41□□□□□ -0.42
NEDD1-213ENST00000557644 TRBV6-7A0A0A0MS04 114 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 A0A0U1RQK1 487 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 CTDSPLO15194 276 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 CRLF1O75462 422 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 ZBTB25P24278 435 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 PYDC2Q56P42 97 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 CT45A1Q5HYN5 189 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 STEAP3Q658P3 488 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 ZNF439Q8NDP4 499 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 CT45A3Q8NHU0 189 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 AJUBAQ96IF1 538 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
NEDD1-213ENST00000557644 SETD2Q9BYW2 2564 aaPredicted RBP12.41□□□□□ -0.42
NEDD1-213ENST00000557644 MDFIC2A0A1B0GVS7 189 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 TOR1AO14656 332 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 LANCL1O43813 399 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 YPEL1O60688 119 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 NAT1P18440 290 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 ARPC4P59998 168 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 HLA-DRB5Q30154 266 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 OR10J5Q8NHC4 309 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 YPEL2Q96QA6 119 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 RDH8Q9NYR8 311 aa12.4□□□□□ -0.42
NEDD1-213ENST00000557644 RFX2P48378 723 aa12.4□□□□□ -0.43
NEDD1-213ENST00000557644 OR5AP2Q8NGF4 316 aa12.4□□□□□ -0.43
NEDD1-213ENST00000557644 MMP28Q9H239 520 aa12.4□□□□□ -0.43
NEDD1-213ENST00000557644 RBBP9O75884 186 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 PMP2P02689 132 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms