RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 LRP2P98164 4655 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 A0A1B0GTI1 187 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 TMEM213A2RRL7 107 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 GOLGA8IPA6NC78 632 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 MMP7P09237 267 aaPredicted RBP3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 PAX6P26367 422 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 PPOXP50336 477 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 PLTPP55058 493 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 DSCR10P59022 87 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 GTF2BQ00403 316 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 INCA1Q0VD86 236 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 RAB31Q13636 194 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 TRIP13Q15645 432 aaPredicted RBP3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 FBXL19-AS1Q494R0 122 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 TMEM255AQ5JRV8 349 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 KCTD16Q68DU8 428 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 HBMQ6B0K9 141 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 GSG1LQ6UXU4 331 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 SSX7Q7RTT5 188 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 LGI3Q8N145 548 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 LINC00301Q8NCQ3 95 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 TMEM161BQ8NDZ6 487 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 RNASEH2CQ8TDP1 164 aaKnown RBP3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 RXFP4Q8TDU9 374 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 PDXPQ96GD0 296 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 HSD17B10Q99714 261 aaKnown RBP3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 CHAC1Q9BUX1 264 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 DRC3Q9H069 523 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 DDX19AQ9NUU7 478 aaKnown RBP3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 SLC7A11Q9UPY5 501 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 CACNG2Q9Y698 323 aa3.33□□□□□ -1.88
MTHFD1-216ENST00000557539 IGLV11-55A0A075B6I3 123 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 TRAV8-6A0A0B4J262 113 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 WI2-2373I1.2A0A1W2PRP0 233 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 NDUFC2-KCTD14E9PQ53 114 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 DNASE2O00115 360 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 TNFRSF11BO00300 401 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 KPNA3O00505 521 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 MYL12BO14950 172 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 ADAP1O75689 374 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 KLF7O75840 302 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 SLC25A14O95258 325 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 SNAP29O95721 258 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 LY6G6CO95867 125 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 IGLV1-47P01700 117 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 UQCRHP07919 91 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 PET100P0DJ07 73 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 SLC25A16P16260 332 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 AQP5P55064 265 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 OR10J3Q5JRS4 329 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 AVPI1Q5T686 147 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 SYT6Q5T7P8 510 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 TMEM236Q5W0B7 351 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 KDM4DQ6B0I6 523 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 MRPL52Q86TS9 123 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 ZNF429Q86V71 674 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 MYPOPQ86VE0 399 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 FUNDC1Q8IVP5 155 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 ATP6V1C2Q8NEY4 427 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 OR1S1Q8NH92 325 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 OR2AE1Q8NHA4 323 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 RORBQ92753 470 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 CDS1Q92903 461 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 PKMYT1Q99640 499 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 SUCNR1Q9BXA5 334 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 TOLLIPQ9H0E2 274 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 C1orf109Q9NX04 203 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 RBAKQ9NYW8 714 aaPredicted RBP3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 ANXA10Q9UJ72 324 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 TFR2Q9UP52 801 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 SIGLEC7Q9Y286 467 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 PPIL1Q9Y3C6 166 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 ORC6Q9Y5N6 252 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 EML6Q6ZMW3 1958 aa3.32□□□□□ -1.88
MTHFD1-216ENST00000557539 TCHHQ07283 1943 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 IGKV1-27A0A075B6S5 117 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 IGHV3-66A0A0C4DH42 116 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 C9J4A7 227 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 KLRC4-KLRK1H3BQV0 150 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 H3BQV1 296 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 CDIPTO14735 213 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 MYO1DO94832 1006 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 KLHL2O95198 593 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 IGKV1D-16P01601 117 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 TRBV12-3P01733 135 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 S100A6P06703 90 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 ZNF17P17021 662 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 DTYMKP23919 212 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 CXCR1P25024 350 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 APLNRP35414 380 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 POLR2IP36954 125 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 LHX2P50458 406 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 CCR6P51684 374 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 GFERP55789 205 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 OR10A3P58181 314 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 SNRPFP62306 86 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 CRADDP78560 199 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 IFITM3Q01628 133 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms