RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SYNGR1O43759 233 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 CA1P00915 261 aaPredicted RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 SEMG1P04279 462 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 ARG1P05089 322 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 LHX8Q68G74 356 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 CDK2AP2O75956 126 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 FCARP24071 287 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 RNF186Q9NXI6 227 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 LINC00469Q8N7U9 141 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 C1SP09871 688 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 IL11RAQ14626 422 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 BAHD1Q8TBE0 780 aaPredicted RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 NUBPLQ8TB37 319 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TUBD1Q9UJT1 453 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TCTN3Q6NUS6 607 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 FOXB1Q99853 325 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 PKD1L3Q7Z443 1732 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 CRPP02741 224 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 SRSF6Q13247 344 aaKnown RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 LHFPL4Q7Z7J7 247 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TTC9CQ8N5M4 171 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 ALX4Q9H161 411 aaPredicted RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 IGHV4-34P06331 123 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TNFAIP6P98066 277 aaPredicted RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF770Q6IQ21 691 aaPredicted RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 HARBI1Q96MB7 349 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 GPR27Q9NS67 375 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TRAV8-7A0A075B6U6 113 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 LGALS1P09382 135 aaKnown RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 DNM1P46Q6ZS02 220 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 C10orf111Q8N326 155 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 RAX2Q96IS3 184 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 MS4A7Q9GZW8 240 aaPredicted RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 SLC26A1Q9H2B4 701 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 VENTXO95231 258 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 LSM6P62312 80 aaKnown RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 ERV3-1Q14264 604 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TMEM249Q2WGJ8 235 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TMEM52BQ4KMG9 183 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 OR2Y1Q8NGV0 311 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 A0A1B0GTH9 108 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 POLR2IP36954 125 aaKnown RBP7.8□□□□□ -1.16
SYNE3-205ENST00000557275 DEFB108BQ8NET1 73 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TM4SF19Q96DZ7 209 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 FLRT3Q9NZU0 649 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 PLXNA1Q9UIW2 1896 aa7.8□□□□□ -1.16
SYNE3-205ENST00000557275 TRBV7-9A0A0J9YWB2 115 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 SAPCD1Q5SSQ6 148 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 FAM222BQ8WU58 562 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 GPR35Q9HC97 309 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 FOXJ2Q9P0K8 574 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 PTPN13Q12923 2485 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF683Q8IZ20 524 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 C5orf30Q96GV9 206 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 GLULP15104 373 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 HBBP68871 147 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 PTPMT1Q8WUK0 201 aaPredicted RBP7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MARVELD3Q96A59 401 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MRPL32Q9BYC8 188 aaKnown RBP7.79□□□□□ -1.16
SYNE3-205ENST00000557275 INSIG2Q9Y5U4 225 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 NPIPB8E9PQR5 432 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 NPIPB9F8W1W9 429 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 NPIPB7O75200 414 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MESTQ5EB52 335 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF418Q8TF45 676 aaPredicted RBP7.79□□□□□ -1.16
SYNE3-205ENST00000557275 SPACA5Q96QH8 159 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 DOCK1Q14185 1865 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 NKAIN4Q8IVV8 208 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 RNF122Q9H9V4 155 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 PLSCR2Q9NRY7 297 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 A0A096LPE4 126 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 A0A1W2PPZ6 126 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 PQLC2LA1A4F0 135 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MT-CO3P00414 261 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 OR4D5Q8NGN0 318 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 SLC25A2Q9BXI2 301 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 ZMIZ1Q9ULJ6 1067 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 LOC389332A0A1B0GUA5 103 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 RABAC1Q9UI14 185 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 TRAV8-2A0A0B4J237 113 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 SERTM1A2A2V5 107 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 CGB2Q6NT52 195 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 TTC28Q96AY4 2481 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MUC4Q99102 2169 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 POC1AQ8NBT0 407 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 C16orf52Q8NHV5 167 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 NCOR1P1Q9H4R4 102 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 IGKV6-21A0A0C4DH24 114 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 HOXA5P20719 270 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MRPS11P82912 194 aaKnown RBP7.79□□□□□ -1.16
SYNE3-205ENST00000557275 PMVKQ15126 192 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 GFYI3L273 518 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 FCMRO60667 390 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MS4A5Q9H3V2 200 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 MED12LQ86YW9 2145 aa7.79□□□□□ -1.16
SYNE3-205ENST00000557275 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
SYNE3-205ENST00000557275 DAOP14920 347 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms