RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ZNF682O95780 498 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 OR2H2O95918 312 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 IGHV3-7P01780 117 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 HLA-DRB1P01911 266 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 IFNA4P05014 189 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 TFAP2AP05549 437 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 GYPBP06028 91 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 FGF2P09038 288 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 CD7P09564 240 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 CLUP10909 449 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 VHLP40337 213 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 FUT6P51993 359 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 TSPAN31Q12999 210 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 APOFQ13790 326 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 CRMP1Q14194 572 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 AKIRIN2Q53H80 203 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 COQ5Q5HYK3 327 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 KRBOX4Q5JUW0 171 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF660Q6AZW8 331 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-223ENST00000557076 FAHD1Q6P587 224 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 CD200R1LQ6Q8B3 271 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 SLC25A26Q70HW3 274 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 ERI1Q8IV48 349 aaKnown RBP3.49□□□□□ -1.85
SCFD1-223ENST00000557076 C8orf31Q8N9H6 132 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 CHST4Q8NCG5 386 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 OR6N2Q8NGY6 317 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 GNPDA2Q8TDQ7 276 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 C2CD4CQ8TF44 421 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 THEM6Q8WUY1 208 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 RTN4IP1Q8WWV3 396 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-223ENST00000557076 NPIPB3Q92617 1050 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 LEAP2Q969E1 77 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 SLAMF9Q96A28 289 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF479Q96JC4 524 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 C7orf34Q96L11 122 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 C7orf26Q96N11 449 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 SPACA5Q96QH8 159 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 MBOAT4Q96T53 435 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 GGTLC1Q9BX51 225 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 CADM1Q9BY67 442 aaKnown RBP3.49□□□□□ -1.85
SCFD1-223ENST00000557076 SLA2Q9H6Q3 261 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 SCRT2Q9NQ03 307 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 GPR173Q9NS66 373 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 FAM206AQ9NX38 181 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 IDI2-AS1Q9NZ38 188 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 BAIAP2Q9UQB8 552 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 AP3M1Q9Y2T2 418 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 V9GYS6 101 aa3.49□□□□□ -1.85
SCFD1-223ENST00000557076 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 IGKV1-27A0A075B6S5 117 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 LOC102724200A0A096LPH7 203 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 A0A0G2JLM5 398 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 FAM230AA0A1W2PPH8 454 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 TMEM120BA0PK00 339 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 UBE2CO00762 179 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 MAGEB3O15480 346 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 XRCC3O43542 346 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 AIREO43918 545 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF254O75437 659 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 IL1AP01583 271 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 IGHV3-11P01762 117 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 SLC2A2P11168 524 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 ALOX5APP20292 161 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 GZMHP20718 246 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 CD40LGP29965 261 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 KIR2DS2P43631 304 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 REG1BP48304 166 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 SYNJ2BPP57105 145 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 PAX5Q02548 391 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 BNIP1Q12981 228 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 DEFB114Q30KQ6 69 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 LGALS9BQ3B8N2 356 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 SAMD4BQ5PRF9 694 aaKnown RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 METTL21CQ5VZV1 264 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 Q6P435 159 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 COMMD2Q86X83 199 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 NPBQ8NG41 125 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 OR51T1Q8NGJ9 327 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 OR52M1Q8NGK5 317 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 RFESDQ8TAC1 157 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 COQ2Q96H96 371 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 C16orf45Q96MC5 204 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 ANKRD60Q9BZ19 345 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 MFFQ9GZY8 342 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 COMMD4Q9H0A8 199 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 EGLN3Q9H6Z9 239 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 RHOFQ9HBH0 211 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 HMG20AQ9NP66 347 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 EXOSC4Q9NPD3 245 aaKnown RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 RBFOX1Q9NWB1 397 aaKnown RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 GID8Q9NWU2 228 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 CALYQ9NYX4 217 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 CNOT2Q9NZN8 540 aaKnown RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 IL36RNQ9UBH0 155 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 NUFIP1Q9UHK0 495 aaKnown RBP3.48□□□□□ -1.85
SCFD1-223ENST00000557076 RNF150Q9ULK6 438 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 APLNQ9ULZ1 77 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 CDH10Q9Y6N8 788 aa3.48□□□□□ -1.85
SCFD1-223ENST00000557076 MEIKINA0A087WXM9 373 aa3.47□□□□□ -1.85
SCFD1-223ENST00000557076 A0A1B0GTI1 187 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms