RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 LCN12Q6JVE5 192 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 SPATA24Q86W54 205 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 SERPINA12Q8IW75 414 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 AQP12AQ8IXF9 295 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 TCTEX1D1Q8N7M0 179 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 TSEN15Q8WW01 171 aaKnown RBP10.64□□□□□ -0.71
ACTN1-219ENST00000556432 MRPL20Q9BYC9 149 aaKnown RBP10.64□□□□□ -0.71
ACTN1-219ENST00000556432 PLEKHA3Q9HB20 300 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 TRAPPC2LQ9UL33 140 aa10.64□□□□□ -0.71
ACTN1-219ENST00000556432 FRAS1Q86XX4 4008 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 DAPL1A0PJW8 107 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 SHISA3A0PJX4 238 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 J3QLW9 94 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 FKBP6O75344 327 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 CDRT1O95170 752 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 BRI3O95415 125 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 ZNF19P17023 458 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 RAB3AP20336 220 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 RBM11P57052 281 aaKnown RBP10.63□□□□□ -0.71
ACTN1-219ENST00000556432 FDX2Q6P4F2 183 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 UNQ5815/PRO19632Q6UWF5 114 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 KCTD20Q7Z5Y7 419 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 OR52N1Q8NH53 320 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 RFKQ969G6 155 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 NRBF2Q96F24 287 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 NSL1Q96IY1 281 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 ZNF355PQ9NSJ1 428 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 RNF150Q9ULK6 438 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 ING4Q9UNL4 249 aa10.63□□□□□ -0.71
ACTN1-219ENST00000556432 ANKRD34BA5PLL1 514 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 CXorf65A6NEN9 183 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 OR4C45A6NMZ5 311 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 GEMIN2O14893 280 aaKnown RBP10.62□□□□□ -0.71
ACTN1-219ENST00000556432 SLC16A6O15403 523 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 HBZP02008 142 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 MT-ND4P03905 459 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 TRGV3P03979 118 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 FSTP19883 344 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 CALB2P22676 271 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 CCR9P51686 369 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 CX3CL1P78423 397 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 PMS2P11Q13670 270 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 ALKBH1Q13686 389 aaKnown RBP10.62□□□□□ -0.71
ACTN1-219ENST00000556432 TMEM30BQ3MIR4 351 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 C19orf54Q5BKX5 351 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 C6orf183Q5T699 404 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 ZNF660Q6AZW8 331 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-219ENST00000556432 ZNF497Q6ZNH5 498 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 PPP1R27Q86WC6 154 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 OR9G4Q8NGQ1 327 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 OR1L1Q8NH94 360 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 FAM103A1Q9BTL3 118 aaKnown RBP10.62□□□□□ -0.71
ACTN1-219ENST00000556432 ST6GALNAC5Q9BVH7 336 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 METTL9Q9H1A3 318 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 FBXL15Q9H469 300 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 IFT22Q9H7X7 185 aa10.62□□□□□ -0.71
ACTN1-219ENST00000556432 RANGRFQ9HD47 186 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-219ENST00000556432 C13orf42A0A1B0GVH6 325 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 TPPPO94811 219 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 CNIH1O95406 144 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 SERPINA2P20848 420 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 CRIP2P52943 208 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-219ENST00000556432 SYNJ2BPP57105 145 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 CD81P60033 236 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 SYT6Q5T7P8 510 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-219ENST00000556432 Q8N402 240 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 PARP16Q8N5Y8 322 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 NPBQ8NG41 125 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 OR51A2Q8NGJ7 313 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 OR4K15Q8NH41 348 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 C4orf36Q96KX1 117 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 RHOVQ96L33 236 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 S100A13Q99584 98 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 NABP2Q9BQ15 211 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 ABHD14AQ9BUJ0 271 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 SLA2Q9H6Q3 261 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 OR2S2Q9NQN1 319 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 ETAA1Q9NY74 926 aa10.61□□□□□ -0.71
ACTN1-219ENST00000556432 CNOT2Q9NZN8 540 aaKnown RBP10.61□□□□□ -0.71
ACTN1-219ENST00000556432 NDUFA3O95167 84 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 TMED1Q13445 227 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 FLOT2Q14254 428 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 STEAP3Q658P3 488 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 LINC00596Q86U02 117 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 RGP1Q92546 391 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-219ENST00000556432 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 RDH12Q96NR8 316 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 CLCC1Q96S66 551 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 THTPAQ9BU02 230 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 ENOPH1Q9UHY7 261 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 NUBP2Q9Y5Y2 271 aa10.6□□□□□ -0.71
ACTN1-219ENST00000556432 IZUMO1RA6ND01 250 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 FCN1O00602 326 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 RRHO14718 337 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 EGR2P11161 476 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-219ENST00000556432 PPP1CCP36873 323 aaKnown RBP10.59□□□□□ -0.71
ACTN1-219ENST00000556432 OR3A3P47888 321 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 GNMTQ14749 295 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 MPV17LQ2QL34 196 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms