RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 FSHBP01225 129 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 EPHA1P21709 976 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 LOXL3P58215 753 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 OR52I2Q8NH67 350 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 GPX8Q8TED1 209 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 FCAMRQ8WWV6 532 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 ANXA10Q9UJ72 324 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 JPT1Q9UK76 154 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 PSG11Q9UQ72 335 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 ARHGAP32A7KAX9 2087 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 IGKV1-6A0A0C4DH72 117 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 ZBTB25P24278 435 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 SAA4P35542 130 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 CEACAM6P40199 344 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 HTD2P86397 168 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 DGCR2P98153 550 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 HERPUD1Q15011 391 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 SRSF7Q16629 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 TMEM30BQ3MIR4 351 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 PYDC2Q56P42 97 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 STEAP3Q658P3 488 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 CCDC190Q86UF4 302 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 OR11H6Q8NGC7 330 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 OR52M1Q8NGK5 317 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 OR9G1Q8NH87 305 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 GINS4Q9BRT9 223 aa11.44□□□□□ -0.58
VIPAS39-208ENST00000556412 ABCA1O95477 2261 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 A0A087X0M5 115 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 A0A1B0GX30 115 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 TPPPO94811 219 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 HLA-DMAP28067 261 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 PRRX1P54821 245 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 Q6ZS49 121 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 BCL6BQ8N143 479 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 OR10J5Q8NHC4 309 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 ZNF596Q8TC21 504 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 SNAPC3Q92966 411 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 RABL2AQ9UBK7 228 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 KLK11Q9UBX7 282 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 RABL2BQ9UNT1 228 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 FAM96BQ9Y3D0 163 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 V9GYH0 126 aa11.43□□□□□ -0.58
VIPAS39-208ENST00000556412 A0A0U1RQK1 487 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 J3QR06 171 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 SULT1C2O00338 296 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 CRLF1O75462 422 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 RBBP9O75884 186 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 RGS11O94810 467 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 MRPS10P82664 201 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 MORN2Q502X0 79 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 ZNF626Q68DY1 528 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 LHFPL4Q7Z7J7 247 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 ODF3BA8MYP8 253 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 GABARAPH6UMI1 98 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 SLC31A2O15432 143 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 PAX6P26367 422 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 CD34P28906 385 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 RCVRNP35243 200 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 ACTBP60709 375 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 ACTG1P63261 375 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 MIDNQ504T8 468 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 OR2AK2Q8NG84 335 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 SMIM4Q8WVI0 70 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 C17orf50Q8WW18 174 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 SLC6A7Q99884 636 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 CABLES2Q9BTV7 478 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 PARP12Q9H0J9 701 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 MMP28Q9H239 520 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 OCEL1Q9H607 264 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 RDH8Q9NYR8 311 aa11.42□□□□□ -0.58
VIPAS39-208ENST00000556412 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.41□□□□□ -0.582e-6■■■■□ 24
VIPAS39-208ENST00000556412 MDFIC2A0A1B0GVS7 189 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 J3QRK9 145 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 YPEL1O60688 119 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 PMP2P02689 132 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 HTR1DP28221 377 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 OR3A3P47888 321 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 BPIFB3P59826 476 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 SCGB2A2Q13296 93 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 HLA-DRB5Q30154 266 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 OR5AP2Q8NGF4 316 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 OR4P4Q8NGL7 312 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 OR5H2Q8NGV7 314 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 YPEL2Q96QA6 119 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 SOSTQ9BQB4 213 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 ABHD14AQ9BUJ0 271 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 NECAP2Q9NVZ3 263 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 HILPDAQ9Y5L2 63 aa11.41□□□□□ -0.58
VIPAS39-208ENST00000556412 TRBV6-7A0A0A0MS04 114 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 CTDSPLO15194 276 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 ST8SIA5O15466 376 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 IGLV1-47P01700 117 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 CTXN2P0C2S0 81 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 NFYAP23511 347 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 HIVEP2P31629 2446 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 ZNF134P52741 427 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 ZNF79Q15937 498 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 SSX2Q16385 188 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms