RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, human

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC2-208	ENST00000556009	TPBG	Q13641	420 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	LIPK	Q5VXJ0	399 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	RNF152	Q8N8N0	203 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009		Q8N9W7	124 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	OR8H1	Q8NGG4	311 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	RAX2	Q96IS3	184 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	S100A13	Q99584	98 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	VCX3A	Q9NNX9	186 aa		13.92	□□□□□ -0.18
NPC2-208	ENST00000556009	CCL24	O00175	119 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	SDCBP	O00560	298 aa	Predicted RBP	13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	RAMP3	O60896	148 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	GPX5	O75715	221 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	ELANE	P08246	267 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	CPE	P16870	476 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	IL3RA	P26951	378 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	CDX1	P47902	265 aa	Predicted RBP	13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	REG1B	P48304	166 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	PPP3R1	P63098	170 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	KIR2DS1	Q14954	304 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	DDI2	Q5TDH0	399 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	ZNF497	Q6ZNH5	498 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	MUL1	Q969V5	352 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	WWC2-AS2	Q96NR7	200 aa		13.91	□□□□□ -0.18
NPC2-208	ENST00000556009	IGHV3-72	A0A0B4J1Y9	119 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	MOS	P00540	346 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	GTF2F2	P13984	249 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	IGFBP3	P17936	291 aa	Predicted RBP	13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	ZNF137P	P52743	207 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	FOXE3	Q13461	319 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	TMEM30B	Q3MIR4	351 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	YIF1B	Q5BJH7	314 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	ATAD3C	Q5T2N8	411 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	OR13C5	Q8NGS8	318 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	TMED9	Q9BVK6	235 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	MRPS26	Q9BYN8	205 aa	Known RBP	13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	SPACA1	Q9HBV2	294 aa		13.9	□□□□□ -0.18
NPC2-208	ENST00000556009	TXNL1	O43396	289 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	RPLP1	P05386	114 aa	Known RBP	13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	NHLRC4	P0CG21	123 aa	Predicted RBP	13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	SERPINA2	P20848	420 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	RPS11	P62280	158 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	GPR176	Q14439	515 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	SSX1	Q16384	188 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	SYT6	Q5T7P8	510 aa	Predicted RBP	13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	STEAP3	Q658P3	488 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	SLC25A48	Q6ZT89	311 aa	Known RBP	13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	GAPT	Q8N292	157 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	MS4A15	Q8N5U1	240 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	OR8U1	Q8NH10	309 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	CCDC107	Q8WV48	283 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	MRPS24	Q96EL2	167 aa	Known RBP	13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	DUX3	Q96PT4	197 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	S1PR3	Q99500	378 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	RAB9B	Q9NP90	201 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	RCC2	Q9P258	522 aa	Known RBP	13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	ZNF580	Q9UK33	172 aa		13.89	□□□□□ -0.19
NPC2-208	ENST00000556009	TRBV5-5	A0A0J9YX44	114 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	AIP	O00170	330 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	VSIG8	P0DPA2	414 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	RPS25	P62851	125 aa	Known RBP	13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	CFHR3	Q02985	330 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	FAM71E2	Q8N5Q1	922 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	ZNF439	Q8NDP4	499 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	TMEM203	Q969S6	136 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009	RASL11B	Q9BPW5	248 aa		13.88	□□□□□ -0.19
NPC2-208	ENST00000556009		A0A1W2PP11	408 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	C12orf77	C9JDV5	145 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	SPINT2	O43291	252 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	IGHG4	P01861	327 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	IGF1	P05019	195 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	TRAM1	Q15629	374 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009		Q499Y3	187 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	SLC22A6	Q4U2R8	563 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	CT45A1	Q5HYN5	189 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	OR5M8	Q8NGP6	311 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	CT45A3	Q8NHU0	189 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	UBALD1	Q8TB05	177 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	NEK7	Q8TDX7	302 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	CHCHD6	Q9BRQ6	235 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	NDUFB11	Q9NX14	153 aa		13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	LSM4	Q9Y4Z0	139 aa	Known RBP	13.87	□□□□□ -0.19
NPC2-208	ENST00000556009	STAB2	Q8WWQ8	2551 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	IGHV3-43	A0A0B4J1X8	118 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	ZNF736	B4DX44	427 aa	Predicted RBP	13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	MCRIP1	C9JLW8	97 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	SLC31A2	O15432	143 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	CA11	O75493	328 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	IGHV3-43D	P0DP04	118 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	ZNF134	P52741	427 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	INSL4	Q14641	139 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	ACSM3	Q53FZ2	586 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	C9orf66	Q5T8R8	295 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	TRAT1	Q6PIZ9	186 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	LCNL1	Q6ZST4	164 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	CDH26	Q8IXH8	852 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	ORAI1	Q96D31	301 aa		13.86	□□□□□ -0.19
NPC2-208	ENST00000556009	OR14A2	Q96R54	314 aa		13.86	□□□□□ -0.19

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