RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 SNX22Q96L94 193 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 FBXL17Q9UF56 701 aa7.11□□□□□ -1.27
SYNE2-220ENST00000555612 CABIN1Q9Y6J0 2220 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 OR2T8A6NH00 312 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 HLA-GP17693 338 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 SLC6A1P30531 599 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 APOBEC3AP31941 199 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF137PP52743 207 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 LCN2P80188 198 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 IL24Q13007 206 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 GUK1Q16774 197 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 PNKDQ8N490 385 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 ZBTB34Q8NCN2 500 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 TMEM167BQ9NRX6 74 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 KIAA1217Q5T5P2 1943 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 ANKRD20A5PA0PJZ0 165 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 MPC2O95563 127 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 SNRPCP09234 159 aaKnown RBP7.1□□□□□ -1.27
SYNE2-220ENST00000555612 GZMMP51124 257 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 DOCK5Q9H7D0 1870 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 RECKO95980 971 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 ADRB1P08588 477 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 KIR3DL2P43630 455 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 PCSK4Q6UW60 755 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 SPACA3Q8IXA5 215 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 FAM57AQ8TBR7 257 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 VWCEQ96DN2 955 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 WASHC3Q9Y3C0 194 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 CROCCQ5TZA2 2017 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 TMSB15BA0A087X1C1 80 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 SCO1O75880 301 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 MC5RP33032 325 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 SLC25A47Q6Q0C1 308 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 OVCH2Q7RTZ1 564 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 MRPL24Q96A35 216 aaKnown RBP7.1□□□□□ -1.27
SYNE2-220ENST00000555612 PRSS27Q9BQR3 290 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF426Q9BUY5 554 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF703Q9H7S9 590 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-220ENST00000555612 HIGD1AQ9Y241 93 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 WSB1Q9Y6I7 421 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 SURF2Q15527 256 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-220ENST00000555612 TM4SF20Q53R12 229 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 STXBP6Q8NFX7 210 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 IL19Q9UHD0 177 aa7.1□□□□□ -1.27
SYNE2-220ENST00000555612 NKX2-6A6NCS4 301 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 C17orf51A8MQB3 221 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 TGFAP01135 160 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 SFTA3P0C7M3 94 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 PRSS54Q6PEW0 395 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 ABHD12Q8N2K0 398 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 OR4A5Q8NH83 315 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 FAM168AQ92567 244 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 LEAP2Q969E1 77 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 SCARF2Q96GP6 870 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-220ENST00000555612 SOSTQ9BQB4 213 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 TMPRSS5Q9H3S3 457 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 TRAPPC1Q9Y5R8 145 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 A0A0U1RQV5 110 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 hCG_38984A0A1B0GV85 526 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 CRHP06850 196 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 G0S2P27469 103 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 NUBP1P53384 320 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 ANKRD55Q3KP44 614 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 ABHD1Q96SE0 405 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 IDI2-AS1Q9NZ38 188 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 KCNAB3O43448 404 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 HPRT1P00492 218 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 LIPFP07098 398 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 CDKN1AP38936 164 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 DEFA6Q01524 100 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 RFLNBQ8N5W9 214 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 POM121Q96HA1 1249 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 KIF13BQ9NQT8 1826 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 IGKV3D-15A0A087WSY6 115 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 IGKV3-15P01624 115 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 SPCS3P61009 180 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 FGF12P61328 243 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 TMEM241Q24JQ0 296 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 PRSS53Q2L4Q9 553 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 RPEL1Q2QD12 228 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 CALYQ9NYX4 217 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 UNC13CQ8NB66 2214 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 CSN3P07498 182 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 TCL1AP56279 114 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 TMEM33P57088 247 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 B2MP61769 119 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 KLF9Q13886 244 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-220ENST00000555612 SNAI3Q3KNW1 292 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 LYZL2Q7Z4W2 148 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 METTL26Q96S19 204 aa7.09□□□□□ -1.27
SYNE2-220ENST00000555612 GREB1LQ9C091 1923 aaPredicted RBP7.09□□□□□ -1.28
SYNE2-220ENST00000555612 KIAA1324LA8MWY0 1029 aaPredicted RBP7.09□□□□□ -1.28
SYNE2-220ENST00000555612 SLC25A17O43808 307 aa7.09□□□□□ -1.28
SYNE2-220ENST00000555612 HPXP02790 462 aa7.09□□□□□ -1.28
SYNE2-220ENST00000555612 EFNB2P52799 333 aa7.09□□□□□ -1.28
SYNE2-220ENST00000555612 BSPH1Q075Z2 132 aa7.09□□□□□ -1.28
SYNE2-220ENST00000555612 LAMTOR1Q6IAA8 161 aa7.09□□□□□ -1.28
SYNE2-220ENST00000555612 Q6ZT83 130 aa7.09□□□□□ -1.28
SYNE2-220ENST00000555612 OR4B1Q8NGF8 309 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms