RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CT45A1Q5HYN5 189 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 DHRS7BQ6IAN0 325 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-214ENST00000554928 SLC16A12Q6ZSM3 486 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 OR56B1Q8NGI3 324 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 OR52M1Q8NGK5 317 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 OR10R2Q8NGX6 335 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 CT45A3Q8NHU0 189 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 MAFIPQ8WZ33 124 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 SLC25A38Q96DW6 304 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 CHMP1AQ9HD42 196 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-214ENST00000554928 VCX3AQ9NNX9 186 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 HSF4Q9ULV5 492 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 MFNGO00587 321 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 SPINT2O43291 252 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 NDUFA7O95182 113 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 TFAP2AP05549 437 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 CRYBA1P05813 215 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 RAB6AP20340 208 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 DYNLT3P51808 116 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 FOXL1Q12952 345 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 IDNKQ5T6J7 187 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 HIST2H2BDQ6DRA6 164 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 GDPGP1Q6ZNW5 385 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 Q6ZS46 218 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 LINC01006Q8NI28 216 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 CFHR4Q92496 578 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 RAB3CQ96E17 227 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 ATG5Q9H1Y0 275 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 OR2S2Q9NQN1 319 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 ABCB10Q9NRK6 738 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 GNG12Q9UBI6 72 aa9.91□□□□□ -0.82
SYNE2-214ENST00000554928 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 IGKV1-6A0A0C4DH72 117 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 SH2D7A6NKC9 451 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-214ENST00000554928 H3BUI4 141 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 TIMM23O14925 209 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 SCTP09683 121 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 HIST1H1DP16402 221 aaKnown RBP9.9□□□□□ -0.82
SYNE2-214ENST00000554928 ALDH3B2P48448 385 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 VBP1P61758 197 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 HABP2Q14520 560 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-214ENST00000554928 MORN2Q502X0 79 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 IZUMO1Q8IYV9 350 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 LINC00311Q8N616 119 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 DRAM1Q8N682 238 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 OR10X1Q8NGY0 326 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 TOMM40LQ969M1 308 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 ST6GALNAC6Q969X2 333 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 RPEQ96AT9 228 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 CMSS1Q9BQ75 279 aaKnown RBP9.9□□□□□ -0.82
SYNE2-214ENST00000554928 Q9N2K0 584 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 KCNIP1Q9NZI2 227 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 OR1A1Q9P1Q5 309 aa9.9□□□□□ -0.82
SYNE2-214ENST00000554928 ZNF230Q9UIE0 474 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-214ENST00000554928 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 IGHV3-72A0A0B4J1Y9 119 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 ZNF736B4DX44 427 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-214ENST00000554928 HSD17B6O14756 317 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 TSPAN9O75954 239 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 CD3GP09693 182 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 HLA-DRB3P79483 266 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 MADCAM1Q13477 382 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 HERPUD1Q15011 391 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 TIMM50Q3ZCQ8 353 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 TRAT1Q6PIZ9 186 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 SLC25A48Q6ZT89 311 aaKnown RBP9.89□□□□□ -0.83
SYNE2-214ENST00000554928 ODF3L1Q8IXM7 274 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 C3orf56Q8N813 242 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 DTX3Q8N9I9 347 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 OR4F5Q8NH21 305 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 OR56B4Q8NH76 319 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 PTX4Q96A99 478 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 OCSTAMPQ9BR26 566 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 MRPS26Q9BYN8 205 aaKnown RBP9.89□□□□□ -0.83
SYNE2-214ENST00000554928 ZNF702PQ9H963 129 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 C12orf4Q9NQ89 552 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 RHBDL2Q9NX52 303 aa9.89□□□□□ -0.83
SYNE2-214ENST00000554928 CLPSL1A2RUU4 121 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 TMEM235A6NFC5 223 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 FAM90A9PA6NNJ1 464 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 ST8SIA5O15466 376 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 SNRNP70P08621 437 aaKnown RBP9.88□□□□□ -0.83
SYNE2-214ENST00000554928 FCGR3AP08637 254 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 PTHLHP12272 177 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 CEACAM3P40198 252 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 SERPINB10P48595 397 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 PROK1P58294 105 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 RPL15P61313 204 aaKnown RBP9.88□□□□□ -0.83
SYNE2-214ENST00000554928 BLCAPP62952 87 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 HTD2P86397 168 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 CTF1Q16619 201 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 TMEM95Q3KNT9 176 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 CDNFQ49AH0 187 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 GPR107Q5VW38 600 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 ZNF554Q86TJ5 538 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 C8orf31Q8N9H6 132 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 CAPSLQ8WWF8 208 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 WFDC12Q8WWY7 111 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms