RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SNX5Q9Y5X3 404 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 TMEM14AQ9Y6G1 99 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 R4GMQ9 66 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 IGKV1-12A0A0C4DH73 117 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 A0A0J9YWU9 116 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 EDF1O60869 148 aaKnown RBP5.14□□□□□ -1.59
ATXN3-224ENST00000554040 KDM4BO94953 1096 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 IGKV1D-12P01611 117 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 CSN3P07498 182 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 IL3RAP26951 378 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 SSTR5P35346 364 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 CRIP2P52943 208 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-224ENST00000554040 ACTR3P61158 418 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 RPS7P62081 194 aaKnown RBP5.14□□□□□ -1.59
ATXN3-224ENST00000554040 TNFRSF9Q07011 255 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 APOFQ13790 326 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 ECSCRQ19T08 205 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 PYHIN1Q6K0P9 492 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 LIN54Q6MZP7 749 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 FAHD1Q6P587 224 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 CPOQ8IVL8 374 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 C8orf31Q8N9H6 132 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 BBS1Q8NFJ9 593 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 OR2K2Q8NGT1 345 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 MRGPRDQ8TDS7 321 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 C10orf35Q96D05 121 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 ANKRD60Q9BZ19 345 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 CHST5Q9GZS9 411 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 RHOFQ9HBH0 211 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 SLC2A8Q9NY64 477 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 ABCD2Q9UBJ2 740 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 IKZF2Q9UKS7 526 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 RAB21Q9UL25 225 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 FBXO7Q9Y3I1 522 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 NUBP2Q9Y5Y2 271 aa5.14□□□□□ -1.59
ATXN3-224ENST00000554040 V9GYY5 206 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-224ENST00000554040 IGKV1-9A0A0C4DH69 117 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 ZNF785A8K8V0 405 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 OR11H12B2RN74 326 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 MAGEB4O15481 346 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 TXNL1O43396 289 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 SYT7O43581 403 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 NDUFB8O95169 186 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 IGLV2-14P01704 120 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 TFAP2AP05549 437 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 CD7P09564 240 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 GZMHP20718 246 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 PRKACBP22694 351 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 SLC2A5P22732 501 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 FASP25445 335 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 ZNF137PP52743 207 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 SYNJ2BPP57105 145 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 NDPQ00604 133 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 PAX5Q02548 391 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 TMEM267Q0VDI3 215 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 CDK5R1Q15078 307 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 MICAQ29983 383 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 ODF4Q2M2E3 257 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 C5orf64Q2M2E5 130 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 RSBN1Q5VWQ0 802 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 ZNF660Q6AZW8 331 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 ZNF322Q6U7Q0 402 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 HACD2Q6Y1H2 254 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 PLEKHG7Q6ZR37 379 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 SLC25A48Q6ZT89 311 aaKnown RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 LAX1Q8IWV1 398 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 CCDC54Q8NEL0 328 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 OR52M1Q8NGK5 317 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 TEX47Q8TBZ9 253 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 PHLDA1Q8WV24 401 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 RITA1Q96K30 269 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 MS4A10Q96PG2 267 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 APOL4Q9BPW4 351 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 ZNF251Q9BRH9 671 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 TTTY10Q9BZA0 68 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 CST11Q9H112 138 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 EFCAB1Q9HAE3 211 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 CNOT2Q9NZN8 540 aaKnown RBP5.13□□□□□ -1.59
ATXN3-224ENST00000554040 SLC23A1Q9UHI7 598 aa5.13□□□□□ -1.59
ATXN3-224ENST00000554040 TRAV39A0A0B4J263 110 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 TRAV24A0A0B4J272 114 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 H0YJX3 145 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 H3BN98 237 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 HSPB6O14558 160 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 NBR2O15453 112 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 RBMXL2O75526 392 aaKnown RBP5.12□□□□□ -1.59
ATXN3-224ENST00000554040 HMGN1P05114 100 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 MRPL3P09001 348 aaKnown RBP5.12□□□□□ -1.59
ATXN3-224ENST00000554040 COX4I1P13073 169 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 ATF1P18846 271 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 CD40LGP29965 261 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 MAGEA2P43356 314 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 ELLP55199 621 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-224ENST00000554040 TPPP2P59282 170 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 ACTBP60709 375 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 RAP2BP61225 183 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 PSME3P61289 254 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 CX3CL1P78423 397 aa5.12□□□□□ -1.59
ATXN3-224ENST00000554040 PPP1R8Q12972 351 aaKnown RBP5.12□□□□□ -1.59
ATXN3-224ENST00000554040 TATDN3Q17R31 274 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms