RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ZNF773Q6PK81 442 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 CEACAM19Q7Z692 300 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 LRRTM1Q86UE6 522 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 LINC00311Q8N616 119 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 C8orf31Q8N9H6 132 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 RPEQ96AT9 228 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 Q96M66 194 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 ASCL2Q99929 193 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 SLC25A33Q9BSK2 321 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 BANF2Q9H503 90 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 ZFP57Q9NU63 452 aa9.34□□□□□ -0.91
SRP54-203ENST00000553544 AMMECR1Q9Y4X0 333 aaPredicted RBP9.34□□□□□ -0.91
SRP54-203ENST00000553544 MCRIP1C9JLW8 97 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 CA11O75493 328 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 UCHL1P09936 223 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 SRMP19623 302 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 MYL9P24844 172 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 MADCAM1Q13477 382 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 DIAPH2-AS1Q14236 149 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 C9orf152Q5JTZ5 239 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 UBE2UQ5VVX9 321 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 RAB12Q6IQ22 244 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 ETV3LQ6ZN32 361 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 CCDC107Q8WV48 283 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 TOMM40LQ969M1 308 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 ARL11Q969Q4 196 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 CYYR1Q96J86 154 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 SELENOIQ9C0D9 397 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 RAB9BQ9NP90 201 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 NDUFB11Q9NX14 153 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 GFOD1Q9NXC2 390 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 PEX16Q9Y5Y5 336 aa9.33□□□□□ -0.92
SRP54-203ENST00000553544 A0A1W2PPE3 182 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 NUDT19A8MXV4 375 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 C12orf77C9JDV5 145 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 M0QZK8 103 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 AIPO00170 330 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 PDCD5O14737 125 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
SRP54-203ENST00000553544 BPNT1O95861 308 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 SNRNP70P08621 437 aaKnown RBP9.32□□□□□ -0.92
SRP54-203ENST00000553544 FAM106CPP0CH98 169 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 FUT3P21217 361 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 PSMB9P28065 219 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 MAP2K4P45985 399 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 GNG10P50151 68 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 RAB7AP51149 207 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 RPL23AP62750 156 aaKnown RBP9.32□□□□□ -0.92
SRP54-203ENST00000553544 ZNF816Q0VGE8 651 aaPredicted RBP9.32□□□□□ -0.92
SRP54-203ENST00000553544 EBI3Q14213 229 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 TIMM50Q3ZCQ8 353 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 Q3ZCU0 254 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 SYT6Q5T7P8 510 aaPredicted RBP9.32□□□□□ -0.92
SRP54-203ENST00000553544 FAM53AQ6NSI3 398 aaPredicted RBP9.32□□□□□ -0.92
SRP54-203ENST00000553544 TMEM91Q6ZNR0 172 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 SPARTQ8N0X7 666 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 OR8H3Q8N146 312 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 OR6M1Q8NGM8 313 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 NEK7Q8TDX7 302 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 ST6GALNAC6Q969X2 333 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 MBNL3Q9NUK0 354 aaKnown RBP9.32□□□□□ -0.92
SRP54-203ENST00000553544 ETAA1Q9NY74 926 aa9.32□□□□□ -0.92
SRP54-203ENST00000553544 A0A087WXM4 84 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 SH2D7A6NKC9 451 aaPredicted RBP9.31□□□□□ -0.92
SRP54-203ENST00000553544 SDCBPO00560 298 aaPredicted RBP9.31□□□□□ -0.92
SRP54-203ENST00000553544 PDCD6O75340 191 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 LYL1P12980 280 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 C8orf86Q6ZUL3 223 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 OR2W3Q7Z3T1 314 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 DRAM1Q8N682 238 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 ZNF439Q8NDP4 499 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 OR10X1Q8NGY0 326 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 OR4K15Q8NH41 348 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 OR56B4Q8NH76 319 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 UBALD1Q8TB05 177 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 TMEM203Q969S6 136 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 P2RX4Q99571 388 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 PLGRKTQ9HBL7 147 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 TRAPPC2LQ9UL33 140 aa9.31□□□□□ -0.92
SRP54-203ENST00000553544 IGHV3-43A0A0B4J1X8 118 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 IGHV1-3A0A0C4DH29 117 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 TRDV1A0A1B0GX56 115 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 TMEM14DPA8MWL7 114 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 HSD17B6O14756 317 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 SLC22A1O15245 554 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 HBZP02008 142 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 GAPDHP04406 335 aaKnown RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 IGHV3-43DP0DP04 118 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 RCC1P18754 421 aaPredicted RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 CALRP27797 417 aaKnown RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 CHATP28329 748 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 HTR2CP28335 458 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 ZNF134P52741 427 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 ZNF137PP52743 207 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 RPS25P62851 125 aaKnown RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 RPS27AP62979 156 aaKnown RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 QRFPP83859 136 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 UNC119Q13432 240 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms