RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 LINC00614P0C842 121 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 PSMB3P49720 205 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 KLF3P57682 345 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-209ENST00000553280 GABARAPL2P60520 117 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 DAD1P61803 113 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 BCL2A1Q16548 175 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 COQ5Q5HYK3 327 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 YIPF7Q8N8F6 280 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 OR51H1Q8NH63 302 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 BCL2L14Q9BZR8 327 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 ZNF286AQ9HBT8 521 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 LINC00527Q9UJ94 153 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 RPUSD1Q9UJJ7 312 aaKnown RBP2.73□□□□□ -1.97
SCFD1-209ENST00000553280 PHLDA3Q9Y5J5 127 aa2.73□□□□□ -1.97
SCFD1-209ENST00000553280 TRBV24-1A0A075B6N3 115 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 A0A0B4J2C4 111 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 IGKV1-12A0A0C4DH73 117 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 C15orf65H3BRN8 121 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 M0QZ92 97 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 IGKV1D-12P01611 117 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 HBZP02008 142 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 GUSBP08236 651 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 KRT7P08729 469 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 FBP1P09467 338 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 CTLA4P16410 223 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 PRPS1L1P21108 318 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 CRABP2P29373 138 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 BLVRAP53004 296 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 ZNF660Q6AZW8 331 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-209ENST00000553280 Q6ZRU5 148 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 LYZL2Q7Z4W2 148 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 NIT1Q86X76 327 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 DOLPP1Q86YN1 238 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 TMEM75Q8N9X5 138 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 OR11G2Q8NGC1 345 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 RNF133Q8WVZ7 376 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 TLCD1Q96CP7 247 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 PACRGQ96M98 296 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-209ENST00000553280 EBNA1BP2Q99848 306 aaKnown RBP2.72□□□□□ -1.97
SCFD1-209ENST00000553280 KCNIP2Q9NS61 270 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 PARVAQ9NVD7 372 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 ZNF443Q9Y2A4 671 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-209ENST00000553280 LINC00588Q9Y4M8 146 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 A0A1W2PP64 1363 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 ADCY9O60503 1353 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 ABCC11Q96J66 1382 aa2.72□□□□□ -1.97
SCFD1-209ENST00000553280 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.71□□□□□ -1.98
SCFD1-209ENST00000553280 A6NED7 52 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 C4orf51C9J302 202 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 LRRN3E7EW58 273 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 H0Y980 276 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 COPEO14579 308 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 IGLV3-19P01714 112 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 CRYBA1P05813 215 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 FOXA1P55317 472 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 APOFQ13790 326 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 OGFRL1Q5TC84 451 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-209ENST00000553280 DNAAF3Q8N9W5 541 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 OR10D3Q8NH80 312 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 ERMNQ8TAM6 284 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 HAVCR2Q8TDQ0 301 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 OR7D2Q96RA2 312 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 TIPINQ9BVW5 301 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 DUSP21Q9H596 190 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 FGFR1OP2Q9NVK5 253 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 POLR3HQ9Y535 204 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-209ENST00000553280 COL1A2P08123 1366 aa2.71□□□□□ -1.98
SCFD1-209ENST00000553280 NPATQ14207 1427 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 IGKV1D-37A0A075B6S9 117 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 VGLL3A8MV65 326 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 PFDN6O15212 129 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 DENRO43583 198 aaKnown RBP2.7□□□□□ -1.98
SCFD1-209ENST00000553280 IGHMP01871 453 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 TYMSP04818 313 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 ATP5G1P05496 136 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 OR13C7P0DN81 318 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 ORM2P19652 201 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 GABRA3P34903 492 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 DHRS2Q13268 280 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 MESTQ5EB52 335 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 C10orf91Q5T1B1 145 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 CST9Q5W186 159 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 OTUB2Q96DC9 234 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 ACY3Q96HD9 319 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 MED18Q9BUE0 208 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 GNB1LQ9BYB4 327 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 OR51B6Q9H340 312 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 OR5V1Q9UGF6 321 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 U3KQK5 164 aa2.7□□□□□ -1.98
SCFD1-209ENST00000553280 SPATA31E1Q6ZUB1 1445 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 TEX50A0A1B0GTY4 177 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 K7EQS6 105 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 CXCR6O00574 342 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 LECT2O14960 151 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 SH2D1AO60880 128 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 S100A6P06703 90 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 OR12D1P0DN82 309 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 MYL6P60660 151 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 IHHQ14623 411 aa2.69□□□□□ -1.98
SCFD1-209ENST00000553280 MAPK14Q16539 360 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms