RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 TOMM40LQ969M1 308 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 RPEQ96AT9 228 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 FAM3DQ96BQ1 224 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 PRSS22Q9GZN4 317 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 HSF4Q9ULV5 492 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 NOTCH1P46531 2555 aa15.36■□□□□ 0.05
PTCH1-227ENST00000553256 DNAH3Q8TD57 4116 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 SNRNP70P08621 437 aaKnown RBP15.35■□□□□ 0.05
PTCH1-227ENST00000553256 HTD2P86397 168 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 RAB11BQ15907 218 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 TMEM95Q3KNT9 176 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 MORN2Q502X0 79 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 PLAC9Q5JTB6 97 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 STEAP3Q658P3 488 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 ODF3L1Q8IXM7 274 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 DTX3Q8N9I9 347 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 OR56B4Q8NH76 319 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 NEDD4LQ96PU5 975 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 SLC25A33Q9BSK2 321 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 PLGRKTQ9HBL7 147 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 KCNK7Q9Y2U2 307 aa15.35■□□□□ 0.05
PTCH1-227ENST00000553256 PRKDCP78527 4128 aaKnown RBP15.34■□□□□ 0.05
PTCH1-227ENST00000553256 IGHV1-3A0A0C4DH29 117 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 TMEM272A0A1B0GTI8 110 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 ADARB2-AS1A8MUL3 147 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 HSD17B6O14756 317 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 SPINT2O43291 252 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 BLVRBP30043 206 aaPredicted RBP15.34■□□□□ 0.05
PTCH1-227ENST00000553256 MNDAP41218 407 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 PSMD7P51665 324 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 GNMTQ14749 295 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 OR10X1Q8NGY0 326 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 FCGR1BQ92637 280 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 STEAP1Q9UHE8 339 aa15.34■□□□□ 0.05
PTCH1-227ENST00000553256 IFITM5A6NNB3 132 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 TSPAN15O95858 294 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 KCTD21Q4G0X4 260 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 C22orf42Q6IC83 251 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 IZUMO1Q8IYV9 350 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 OR52L2PQ8NGH6 319 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 OR10V1Q8NGI7 309 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 RTN4IP1Q8WWV3 396 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-227ENST00000553256 TXNL4BQ9NX01 149 aaKnown RBP15.33■□□□□ 0.04
PTCH1-227ENST00000553256 AK3Q9UIJ7 227 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 JPT1Q9UK76 154 aa15.33■□□□□ 0.04
PTCH1-227ENST00000553256 M0QZ24 198 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 YPEL1O60688 119 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 FAM106CPP0CH98 169 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 ARHGDIBP52566 201 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 HES5Q5TA89 166 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 CAPSLQ8WWF8 208 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 ARHGAP5-AS1Q96IT6 56 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 YPEL2Q96QA6 119 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 HDHD3Q9BSH5 251 aaPredicted RBP15.32■□□□□ 0.04
PTCH1-227ENST00000553256 URM1Q9BTM9 101 aaKnown RBP15.32■□□□□ 0.04
PTCH1-227ENST00000553256 PLSCR3Q9NRY6 295 aa15.32■□□□□ 0.04
PTCH1-227ENST00000553256 SH2D7A6NKC9 451 aaPredicted RBP15.31■□□□□ 0.04
PTCH1-227ENST00000553256 ZNF736B4DX44 427 aaPredicted RBP15.31■□□□□ 0.04
PTCH1-227ENST00000553256 RAB27BO00194 218 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 GAPDHP04406 335 aaKnown RBP15.31■□□□□ 0.04
PTCH1-227ENST00000553256 VSIG10L2P0DP72 767 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 CD28P10747 220 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 REG1BP48304 166 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 MOGAT2Q3SYC2 334 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 TCTEX1D4Q5JR98 221 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 PRR18Q8N4B5 295 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 C5orf56Q8N8D9 126 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 RBMXL1Q96E39 390 aaKnown RBP15.31■□□□□ 0.04
PTCH1-227ENST00000553256 PECRQ9BY49 303 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 MMP27Q9H306 513 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 RAB9BQ9NP90 201 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 OR2S2Q9NQN1 319 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 PLEKHJ1Q9NW61 149 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 GNG12Q9UBI6 72 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 STUB1Q9UNE7 303 aa15.31■□□□□ 0.04
PTCH1-227ENST00000553256 A0A0B4J203 849 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 IGKV1D-33P01593 117 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 IGKV1-33P01594 117 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 RAB3BP20337 219 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 PSMB9P28065 219 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 PPP1CCP36873 323 aaKnown RBP15.3■□□□□ 0.04
PTCH1-227ENST00000553256 VEGFCP49767 419 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 ABCA11PQ4W5N1 156 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 Q6ZTK2 550 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 C11orf44Q8N8P7 122 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 EAF1Q96JC9 268 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-227ENST00000553256 AKR1E2Q96JD6 320 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 ZNF251Q9BRH9 671 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 IFI27L2Q9H2X8 130 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 RIMS4Q9H426 269 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-227ENST00000553256 RAB22AQ9UL26 194 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 MOB4Q9Y3A3 225 aa15.3■□□□□ 0.04
PTCH1-227ENST00000553256 M0QZK8 103 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 PDCD5O14737 125 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 FGF16O43320 207 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 LANCL1O43813 399 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 CD1BP29016 333 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 VDAC2P45880 294 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-227ENST00000553256 CD83Q01151 205 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 MOB1BQ7L9L4 216 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms