RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 CCNOP22674 350 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 CD200P41217 278 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 SLC35A2P78381 396 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 SKP2Q13309 424 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 PAFAH1B3Q15102 231 aaKnown RBP0.95□□□□□ -2.26
USP44-207ENST00000552237 PDK2Q15119 407 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 PDGFRLQ15198 375 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 OR11H1Q8NG94 326 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 FAM45AQ8TCE6 357 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 MRPS24Q96EL2 167 aaKnown RBP0.95□□□□□ -2.26
USP44-207ENST00000552237 MGLLQ99685 303 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 Q9BRP9 147 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 MRPL32Q9BYC8 188 aaKnown RBP0.95□□□□□ -2.26
USP44-207ENST00000552237 GOLPH3Q9H4A6 298 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 NDUFB11Q9NX14 153 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
USP44-207ENST00000552237 MYO5BQ9ULV0 1848 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 IGHV3-73A0A0B4J1V6 119 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 ARRDC5A6NEK1 342 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 C9J4A7 227 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 POLR3GO15318 223 aaPredicted RBP0.94□□□□□ -2.26
USP44-207ENST00000552237 EPPINO95925 133 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 SLC25A16P16260 332 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 ATF1P18846 271 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 PEBP1P30086 187 aaKnown RBP0.94□□□□□ -2.26
USP44-207ENST00000552237 ACTR1BP42025 376 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 SULT1A2P50226 295 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 TPRXLQ17RH7 258 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 MRPL51Q4U2R6 128 aaKnown RBP0.94□□□□□ -2.26
USP44-207ENST00000552237 LRRC39Q96DD0 335 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 MRAP2Q96G30 205 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 UPK3BQ9BT76 320 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 PECRQ9BY49 303 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 PRRG3Q9BZD7 231 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 C16orf95Q9H693 158 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 DMAC2Q9NW81 257 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 CHMP5Q9NZZ3 219 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 NXT1Q9UKK6 140 aaKnown RBP0.94□□□□□ -2.26
USP44-207ENST00000552237 RBMX2Q9Y388 322 aaKnown RBP0.94□□□□□ -2.26
USP44-207ENST00000552237 FIS1Q9Y3D6 152 aa0.94□□□□□ -2.26
USP44-207ENST00000552237 DNMT1P26358 1616 aaKnown RBP0.93□□□□□ -2.26
USP44-207ENST00000552237 ABCB11O95342 1321 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 TRGV2A0A075B6R0 118 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 J3QQQ9 107 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 CYTH3O43739 400 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 TPM1P09493 284 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 IGHV3-30-3P0DP02 117 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 CTSEP14091 401 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 UGT2B10P36537 528 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 RPL26P61254 145 aaKnown RBP0.93□□□□□ -2.26
USP44-207ENST00000552237 XIAPP98170 497 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 ZBTB6Q15916 424 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 BSXQ3C1V8 233 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 HENMT1Q5T8I9 393 aaKnown RBP0.93□□□□□ -2.26
USP44-207ENST00000552237 AHSA2Q719I0 299 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 LRRC20Q8TCA0 184 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 PPWD1Q96BP3 646 aaKnown RBP0.93□□□□□ -2.26
USP44-207ENST00000552237 SPZ1Q9BXG8 430 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 OR51E2Q9H255 320 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 RPL26L1Q9UNX3 145 aaKnown RBP0.93□□□□□ -2.26
USP44-207ENST00000552237 STK38LQ9Y2H1 464 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 ALG5Q9Y673 324 aa0.93□□□□□ -2.26
USP44-207ENST00000552237 DENND4BO75064 1496 aaPredicted RBP0.92□□□□□ -2.26
USP44-207ENST00000552237 NYNRINQ9P2P1 1898 aaKnown RBP0.92□□□□□ -2.26
USP44-207ENST00000552237 CRXO43186 299 aaPredicted RBP0.92□□□□□ -2.26
USP44-207ENST00000552237 APOA1P02647 267 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 S100A9P06702 114 aaKnown RBP0.92□□□□□ -2.26
USP44-207ENST00000552237 ESDP10768 282 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 ORM2P19652 201 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 RCVRNP35243 200 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 TNNC1P63316 161 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 ANGPT1Q15389 498 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 AGTRAPQ6RW13 159 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 RASL11AQ6T310 242 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 Q6ZRN7 208 aaPredicted RBP0.92□□□□□ -2.26
USP44-207ENST00000552237 GLT6D1Q7Z4J2 308 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 DOLPP1Q86YN1 238 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 SLC35F6Q8N357 371 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 C10orf126Q8N4M7 172 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 YIPF7Q8N8F6 280 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 CDRT4Q8N9R6 151 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 CCDC124Q96CT7 223 aaKnown RBP0.92□□□□□ -2.26
USP44-207ENST00000552237 MED18Q9BUE0 208 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 TIMM21Q9BVV7 248 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 MND1Q9BWT6 205 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 C1QTNF6Q9BXI9 259 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 CDCA4Q9BXL8 241 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 RAB3GAP2Q9H2M9 1393 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 TNIKQ9UKE5 1360 aa0.92□□□□□ -2.26
USP44-207ENST00000552237 HELZ2Q9BYK8 2649 aaKnown RBP0.91□□□□□ -2.26
USP44-207ENST00000552237 ADAMTSL1Q8N6G6 1762 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 IGKV1D-43A0A0B4J1Z2 117 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 A0A1B0GVG6 124 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 DHRS12A0PJE2 317 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 H3BSA7 217 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 UBFD1O14562 309 aaKnown RBP0.91□□□□□ -2.26
USP44-207ENST00000552237 SNAP29O95721 258 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 NAPSAO96009 420 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 LYNX1P0DP58 116 aa0.91□□□□□ -2.26
USP44-207ENST00000552237 GADD45AP24522 165 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms