RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IMPAD1Q9NX62 359 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF107Q9UII5 783 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 DHDHQ9UQ10 334 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 GAB2Q9UQC2 676 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF256Q9Y2P7 627 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 AMMECR1Q9Y4X0 333 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 PLECQ15149 4684 aaKnown RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 TRAV8-7A0A075B6U6 113 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 OOSP1A8MZH6 123 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 C12orf77C9JDV5 145 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 I3L521 148 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 FCN1O00602 326 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ATP6V0E1O15342 81 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 FGF16O43320 207 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 SOX15O60248 233 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 SAP30O75446 220 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 MOSP00540 346 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 LALBAP00709 142 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 HBZP02008 142 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 MT-ND4P03905 459 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 DBTP11182 482 aaKnown RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 RAB3AP20336 220 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 PSMB8P28062 276 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 BLVRBP30043 206 aaPredicted RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 PPP1CCP36873 323 aaKnown RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 MTNR1BP49286 362 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ETV1P50549 477 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 RAB7AP51149 207 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 RBM11P57052 281 aaKnown RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 GABPB1Q06547 395 aaPredicted RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 FOXE3Q13461 319 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 GALEQ14376 348 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ECSCRQ19T08 205 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 TGIF2LXQ8IUE1 241 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 SERPINA12Q8IW75 414 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 SAXO1Q8IYX7 474 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 OR8H3Q8N146 312 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 CBR4Q8N4T8 237 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 FAM71E2Q8N5Q1 922 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ACBD7Q8N6N7 88 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF491Q8N8L2 437 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 CHST4Q8NCG5 386 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF439Q8NDP4 499 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 OR52I1Q8NGK6 324 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 OR2T10Q8NGZ9 312 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 OR8U1Q8NH10 309 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 OR52N1Q8NH53 320 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 CREB3L1Q96BA8 519 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 C10orf35Q96D05 121 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 CLCC1Q96S66 551 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 SLC29A1Q99808 456 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 FAM103A1Q9BTL3 118 aaKnown RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 PARP12Q9H0J9 701 aaKnown RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 RETNQ9HD89 108 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ISYNA1Q9NPH2 558 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 FAM118AQ9NWS6 357 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 CLEC2DQ9UHP7 191 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 EXOGQ9Y2C4 368 aaKnown RBP5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 ALMS1Q8TCU4 4167 aa5.29□□□□□ -1.56
PRPF40B-214ENST00000551320 TNCP24821 2201 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 IGHV4OR15-8A0A075B7B6 117 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 A0A087WW49 117 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 TMEM30CPA0ZSE6 113 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 H3BNX3 289 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 AIPO00170 330 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 BAG2O95816 211 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 IGHG4P01861 327 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 ALPLP05186 524 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 CLEC2LP0C7M8 214 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 NHLRC4P0CG21 123 aaPredicted RBP5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 LIMS3P0CW19 117 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 LIMS4P0CW20 117 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 LYL1P12980 280 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 GABRB1P18505 474 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 VDAC1P21796 283 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 SOX6P35712 828 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 CDX1P47902 265 aaPredicted RBP5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 CCR9P51686 369 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 SCAND1P57086 179 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF816Q0VGE8 651 aaPredicted RBP5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 EBI3Q14213 229 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 INSL4Q14641 139 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 MMDQ15546 238 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 LRRC36Q1X8D7 754 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 SYT6Q5T7P8 510 aaPredicted RBP5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 DDI2Q5TDH0 399 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 ELP2Q6IA86 826 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 OR10K2Q6IF99 312 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF529Q6P280 563 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 PARP16Q8N5Y8 322 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 OR5D14Q8NGL3 314 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 C4orf3Q8WVX3 66 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 APH1BQ8WW43 257 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 RFKQ969G6 155 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 MUL1Q969V5 352 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 FAM46BQ96A09 425 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 CENPNQ96H22 339 aaPredicted RBP5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 ANKRD60Q9BZ19 345 aa5.28□□□□□ -1.56
PRPF40B-214ENST00000551320 LINC00574Q9H8X3 128 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms