RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 C19orf12Q9NSK7 152 aa6.68□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF221Q9UK13 617 aa6.68□□□□□ -1.34
DEPDC4-207ENST00000549249 ANKRD17O75179 2603 aaKnown RBP6.68□□□□□ -1.34
DEPDC4-207ENST00000549249 IGKV1D-13A0A0B4J2D9 117 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 FUOMA2VDF0 154 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 MMP23AO75900 390 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 DIRAS3O95661 229 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 PPYP01298 95 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 IGKV1-13P0DP09 117 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 RPS2P15880 293 aaKnown RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 ANXA7P20073 488 aaKnown RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 FPR2P25090 351 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 NPY4RP50391 375 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 PDLIM4P50479 330 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 MECP2P51608 486 aaKnown RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 RAG2P55895 527 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 ATP5J2P56134 94 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 RPL31P62899 125 aaKnown RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 BAMBIQ13145 260 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 TATDN3Q17R31 274 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 LRRC10Q5BKY1 277 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 WDR25Q64LD2 544 aaPredicted RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 TRAT1Q6PIZ9 186 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF554Q86TJ5 538 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 TMEM17Q86X19 198 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 CADM3Q8N126 398 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 ZDHHC22Q8N966 263 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 ADAD2Q8NCV1 583 aaKnown RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 OR52L2PQ8NGH6 319 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 OR6F1Q8NGZ6 308 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 RFESDQ8TAC1 157 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 CAPSLQ8WWF8 208 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 IL1F10Q8WWZ1 152 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 H1FXQ92522 213 aaKnown RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 CORO2AQ92828 525 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 MOB3AQ96BX8 217 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 NEIL1Q96FI4 390 aaPredicted RBP6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 PERPQ96FX8 193 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 BPESC1Q9GZL8 116 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 TOLLIPQ9H0E2 274 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 NARFLQ9H6Q4 476 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 CALYQ9NYX4 217 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 KCNIP1Q9NZI2 227 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 OR6C3Q9NZP0 311 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 MIOXQ9UGB7 285 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 SLC23A1Q9UHI7 598 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 PCDHB10Q9UN67 800 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 GPR132Q9UNW8 380 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 ALG5Q9Y673 324 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 LINC00312Q9Y6C7 94 aa6.67□□□□□ -1.34
DEPDC4-207ENST00000549249 MED13LQ71F56 2210 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 C2CD3Q4AC94 2353 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 APCP25054 2843 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 SPG11Q96JI7 2443 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 ABCA2Q9BZC7 2435 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 TRGV10A0A0A0MS01 117 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 IGHV3-43A0A0B4J1X8 118 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 C7orf66A4D0T2 115 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF729A6NN14 1252 aaPredicted RBP6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 VWC2LB2RUY7 222 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 C22orf46C9J442 243 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 F2RL2O00254 374 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 PEX14O75381 377 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 IGHV2-5P01817 119 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 HEXAP06865 529 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 CTXN2P0C2S0 81 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 IGHV3-43DP0DP04 118 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 PGAM2P15259 253 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 CCL3L1P16619 93 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 PI3P19957 117 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 GZMHP20718 246 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 OMGP23515 440 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 PPP1CCP36873 323 aaKnown RBP6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 BCAP31P51572 246 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 UCP3P55916 312 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 DLX6P56179 175 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 LOXL3P58215 753 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 FXYD4P59646 89 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 HTD2P86397 168 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 MEF2CQ06413 473 aaPredicted RBP6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 LTC4SQ16873 150 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 TMEM200BQ69YZ2 307 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 SPICQ8N5J4 248 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 OR8B3Q8NGG8 313 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 OR52B4Q8NGK2 314 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 OR10J5Q8NHC4 309 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 CLDND2Q8NHS1 167 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 C10orf105Q8TEF2 133 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 TOMM40LQ969M1 308 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 TMEM230Q96A57 120 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 GALMQ96C23 342 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 OR8B2Q96RD0 313 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 SEC22CQ9BRL7 303 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 RTBDNQ9BSG5 229 aaPredicted RBP6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 GHITMQ9H3K2 345 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 C5orf66Q9H5L9 145 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 LINC00574Q9H8X3 128 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 RDH8Q9NYR8 311 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF69Q9UC07 566 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms