RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 MRPS10P82664 201 aaKnown RBP17.17■□□□□ 0.34
CACNB3-210ENST00000548874 IL18Q14116 193 aa17.17■□□□□ 0.34
CACNB3-210ENST00000548874 Q3ZCU0 254 aa17.17■□□□□ 0.34
CACNB3-210ENST00000548874 STEAP3Q658P3 488 aa17.17■□□□□ 0.34
CACNB3-210ENST00000548874 ZNF626Q68DY1 528 aa17.17■□□□□ 0.34
CACNB3-210ENST00000548874 ABHD12Q8N2K0 398 aa17.17■□□□□ 0.34
CACNB3-210ENST00000548874 OR52L2PQ8NGH6 319 aa17.17■□□□□ 0.34
CACNB3-210ENST00000548874 OR2S2Q9NQN1 319 aa17.17■□□□□ 0.34
CACNB3-210ENST00000548874 MTORP42345 2549 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 MEIS3P1A6NDR6 274 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 NAT1P18440 290 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 SRP14P37108 136 aaKnown RBP17.16■□□□□ 0.34
CACNB3-210ENST00000548874 GNMTQ14749 295 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 LY6G6FQ5SQ64 297 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 RUSC1-AS1Q66K80 236 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 LINC00299Q6ZSB3 139 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 C9orf139Q6ZV77 190 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 PIP4P2Q8N4L2 257 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 C8orf31Q8N9H6 132 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 BEST4Q8NFU0 473 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 OR9G1Q8NH87 305 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 IL1F10Q8WWZ1 152 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 SNAPC3Q92966 411 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 GNG12Q9UBI6 72 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 ANXA10Q9UJ72 324 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 PSG11Q9UQ72 335 aa17.16■□□□□ 0.34
CACNB3-210ENST00000548874 GABARAPH6UMI1 98 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 NPFFO15130 113 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 YPEL1O60688 119 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 CRLF1O75462 422 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 IGLV1-47P01700 117 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 PTBP1P26599 531 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNB3-210ENST00000548874 TUSC1Q2TAM9 212 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 CHRFAM7AQ494W8 412 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 MORN2Q502X0 79 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 MIDNQ504T8 468 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 IGSF11Q5DX21 431 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 FAM131AQ6UXB0 335 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 BRD3OSQ6XYD6 125 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 ZNF439Q8NDP4 499 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 BEND2Q8NDZ0 799 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 OR10V1Q8NGI7 309 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 OR52I2Q8NH67 350 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 ZNF596Q8TC21 504 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 SMIM4Q8WVI0 70 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 LEAP2Q969E1 77 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 YPEL2Q96QA6 119 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 TOLLIPQ9H0E2 274 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 IFT46Q9NQC8 304 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 ZNF69Q9UC07 566 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 NAV3Q8IVL0 2385 aa17.15■□□□□ 0.34
CACNB3-210ENST00000548874 TEP1Q99973 2627 aaKnown RBP17.15■□□□□ 0.34
CACNB3-210ENST00000548874 TRBV6-7A0A0A0MS04 114 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 A0A1W2PRD5 423 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 A0A1W2PRF3 423 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 A0A1W2PRM7 423 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 J3QR06 171 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 IGHV3-7P01780 117 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 PPP1CCP36873 323 aaKnown RBP17.14■□□□□ 0.33
CACNB3-210ENST00000548874 DGCR2P98153 550 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 ZNF79Q15937 498 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 OR4P4Q8NGL7 312 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 OR1A1Q9P1Q5 309 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 MTFP1Q9UDX5 166 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 SLC23A1Q9UHI7 598 aa17.14■□□□□ 0.33
CACNB3-210ENST00000548874 GSTZ1O43708 216 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-210ENST00000548874 ARG1P05089 322 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 FCER2P06734 321 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 CTXN2P0C2S0 81 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 SRD5A1P18405 259 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 EPHA1P21709 976 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 ZBTB25P24278 435 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 RCVRNP35243 200 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 SAA4P35542 130 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 HLA-DRB5Q30154 266 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 RNASE12Q5GAN4 147 aaKnown RBP17.13■□□□□ 0.33
CACNB3-210ENST00000548874 SPANXN2Q5MJ10 180 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 LINC00311Q8N616 119 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 FCAMRQ8WWV6 532 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 AJUBAQ96IF1 538 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 KLK11Q9UBX7 282 aa17.13■□□□□ 0.33
CACNB3-210ENST00000548874 RGS11O94810 467 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 GNG10P50151 68 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 ZNF134P52741 427 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 PRRX1P54821 245 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 LDLRAD2Q5SZI1 272 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 SLC25A48Q6ZT89 311 aaKnown RBP17.12■□□□□ 0.33
CACNB3-210ENST00000548874 LYSMD2Q8IV50 215 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 BCL6BQ8N143 479 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-210ENST00000548874 MS4A7Q9GZW8 240 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-210ENST00000548874 MMP28Q9H239 520 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 ZNRD1Q9P1U0 126 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 RBMX2Q9Y388 322 aaKnown RBP17.12■□□□□ 0.33
CACNB3-210ENST00000548874 TBL2Q9Y4P3 447 aaKnown RBP17.12■□□□□ 0.33
CACNB3-210ENST00000548874 SOX21Q9Y651 276 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-210ENST00000548874 SVEP1Q4LDE5 3571 aa17.12■□□□□ 0.33
CACNB3-210ENST00000548874 A0A1W2PPE3 182 aa17.11■□□□□ 0.33
CACNB3-210ENST00000548874 TOR1AO14656 332 aa17.11■□□□□ 0.33
CACNB3-210ENST00000548874 ITGB1BP1O14713 200 aa17.11■□□□□ 0.33
CACNB3-210ENST00000548874 BET1O15155 118 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms