RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PTPRJQ12913 1337 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 CR1P17927 2039 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 RP1L1Q8IWN7 2480 aaPredicted RBP0.86□□□□□ -2.27
CCDC38-206ENST00000548771 IGHV3-73A0A0B4J1V6 119 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 CYTH3O43739 400 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 EPPINO95925 133 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 CTSEP14091 401 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 SLC25A16P16260 332 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 UGT2B10P36537 528 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 ACTR1BP42025 376 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 HINT1P49773 126 aaPredicted RBP0.86□□□□□ -2.27
CCDC38-206ENST00000548771 SULT1A2P50226 295 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 CARD18P57730 90 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 TNNC1P63316 161 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 SLC35A2P78381 396 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 SKP2Q13309 424 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 PDGFRLQ15198 375 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 HENMT1Q5T8I9 393 aaKnown RBP0.86□□□□□ -2.27
CCDC38-206ENST00000548771 N4BP2L1Q5TBK1 243 aaPredicted RBP0.86□□□□□ -2.27
CCDC38-206ENST00000548771 AHSA2Q719I0 299 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 OR4X2Q8NGF9 303 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 OR5D18Q8NGL1 313 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 TMBIM1Q969X1 311 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 LRRC39Q96DD0 335 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 MRAP2Q96G30 205 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 OR51E2Q9H255 320 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 C11orf49Q9H6J7 331 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 DMAC2Q9NW81 257 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 NXT1Q9UKK6 140 aaKnown RBP0.86□□□□□ -2.27
CCDC38-206ENST00000548771 AMMECR1Q9Y4X0 333 aaPredicted RBP0.86□□□□□ -2.27
CCDC38-206ENST00000548771 ALG5Q9Y673 324 aa0.86□□□□□ -2.27
CCDC38-206ENST00000548771 SRCAPQ6ZRS2 3230 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 IGLV3-9A0A075B6K5 115 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 C9J4A7 227 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 RTEL1-TNFRSF6BF6WH68 1400 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 H3BSA7 217 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 POLR3GO15318 223 aaPredicted RBP0.85□□□□□ -2.27
CCDC38-206ENST00000548771 LY6HO94772 140 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 SNAP29O95721 258 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 IGHV3-30-3P0DP02 117 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 RCVRNP35243 200 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 C1QTNF8P60827 252 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 LGALS9CQ6DKI2 356 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 DOLPP1Q86YN1 238 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 OR11H1Q8NG94 326 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 ZNF563Q8TA94 476 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 Q9BRP9 147 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 CDCA4Q9BXL8 241 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 PECRQ9BY49 303 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 PRRG3Q9BZD7 231 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 RAB1BQ9H0U4 201 aa0.85□□□□□ -2.27
CCDC38-206ENST00000548771 METTL17Q9H7H0 456 aaPredicted RBP0.85□□□□□ -2.27
CCDC38-206ENST00000548771 TRGV2A0A075B6R0 118 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 DHRS12A0PJE2 317 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 ARRDC5A6NEK1 342 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 EFCAB9A8MZ26 197 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 J3QQQ9 107 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 NDUFS8O00217 210 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 CRXO43186 299 aaPredicted RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 ANGP03950 147 aaKnown RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 PEBP1P30086 187 aaKnown RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 RPL26P61254 145 aaKnown RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 XIAPP98170 497 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 FLOT2Q14254 428 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 ZBTB6Q15916 424 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 C18orf21Q32NC0 220 aaPredicted RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 MRPL51Q4U2R6 128 aaKnown RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 CENPWQ5EE01 88 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 AGTRAPQ6RW13 159 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 RASL11AQ6T310 242 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 LRRC6Q86X45 466 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 ST13P4Q8IZP2 240 aaPredicted RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 C10orf126Q8N4M7 172 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 CDRT4Q8N9R6 151 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 MED18Q9BUE0 208 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 MND1Q9BWT6 205 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 C1QTNF6Q9BXI9 259 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 MRPL32Q9BYC8 188 aaKnown RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 GTSF1LQ9H1H1 148 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 RPL26L1Q9UNX3 145 aaKnown RBP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 SNX24Q9Y343 169 aa0.84□□□□□ -2.27
CCDC38-206ENST00000548771 PUS1Q9Y606 427 aaKnown RBP eCLIP0.84□□□□□ -2.27
CCDC38-206ENST00000548771 RGS12O14924 1447 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 H3BPC8 53 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 ORM2P19652 201 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 GADD45AP24522 165 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 ACTBP60709 375 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 ACTG1P63261 375 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 OR10J3Q5JRS4 329 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 TIMM23BQ5SRD1 257 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 GLT6D1Q7Z4J2 308 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 MRPL52Q86TS9 123 aaKnown RBP0.83□□□□□ -2.28
CCDC38-206ENST00000548771 SLC35F6Q8N357 371 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 YIPF7Q8N8F6 280 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 OR2Y1Q8NGV0 311 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 ANGPTL6Q8NI99 470 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 TMEM239Q8WW34 195 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 SPZ1Q9BXG8 430 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 C16orf95Q9H693 158 aa0.83□□□□□ -2.28
CCDC38-206ENST00000548771 TMEM216Q9P0N5 145 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms