RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 KCNG3Q8TAE7 436 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 TM2D1Q9BX74 207 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 PEX16Q9Y5Y5 336 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 HERC1Q15751 4861 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 TRAV1-2A0A0B4J238 106 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 TRDV1A0A1B0GX56 115 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 BUB1B-PAK6H3BSN5 160 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 J3QR06 171 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 PDCD6O75340 191 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 BPNT1O95861 308 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 JUNBP17275 347 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-217ENST00000548420 SSTR5P35346 364 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 PRRX1P54821 245 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 UNC119Q13432 240 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 OR10K2Q6IF99 312 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 FAM89BQ8N5H3 189 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 OR5AU1Q8NGC0 362 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 OR52M1Q8NGK5 317 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 OR9G1Q8NH87 305 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 RFESDQ8TAC1 157 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 NDNFQ8TB73 568 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 CREB3L1Q96BA8 519 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 RAB18Q9NP72 206 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 PSG11Q9UQ72 335 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 AK6Q9Y3D8 172 aaKnown RBP11.07□□□□□ -0.64
PTCH1-217ENST00000548420 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
PTCH1-217ENST00000548420 FAM172BPA6NC97 362 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 LEUTXA8MZ59 168 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 OOSP1A8MZH6 123 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 F2RL2O00254 374 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 TOR1AO14656 332 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 NFYBP25208 207 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 CALRP27797 417 aaKnown RBP11.06□□□□□ -0.64
PTCH1-217ENST00000548420 PSMD7P51665 324 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 OR2W3Q7Z3T1 314 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 FCGR1BQ92637 280 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 FAM46BQ96A09 425 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 CYYR1Q96J86 154 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 MBNL3Q9NUK0 354 aaKnown RBP11.06□□□□□ -0.64
PTCH1-217ENST00000548420 ETAA1Q9NY74 926 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 PITPNC1Q9UKF7 332 aa11.06□□□□□ -0.64
PTCH1-217ENST00000548420 SHISA3A0PJX4 238 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 AIPO00170 330 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 CCRL2O00421 344 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 RAMP3O60896 148 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 Q3ZCU0 254 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 SYT6Q5T7P8 510 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-217ENST00000548420 ZNF773Q6PK81 442 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 ZNF554Q86TJ5 538 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 LINC00311Q8N616 119 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 NEK7Q8TDX7 302 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 CCDC107Q8WV48 283 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 ARL11Q969Q4 196 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 TMEM59Q9BXS4 323 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 KCNK15Q9H427 330 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 ABCB10Q9NRK6 738 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 V9GY05 133 aa11.05□□□□□ -0.64
PTCH1-217ENST00000548420 A0A0A6YYD4 124 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 TCRBV4S1A1TA0A5B7 111 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 UBE2QL1A1L167 161 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 FAM90A9PA6NNJ1 464 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 FOXI3A8MTJ6 420 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-217ENST00000548420 C12orf77C9JDV5 145 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 ARSBP15848 533 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 RCC1P18754 421 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-217ENST00000548420 FGF9P31371 208 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-217ENST00000548420 CEACAM3P40198 252 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 KCTD21Q4G0X4 260 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 PLA1AQ53H76 456 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 SULT4A1Q9BR01 284 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 NICN1Q9BSH3 213 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 GFOD1Q9NXC2 390 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 TRAPPC2LQ9UL33 140 aa11.04□□□□□ -0.64
PTCH1-217ENST00000548420 TSSC4Q9Y5U2 329 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-217ENST00000548420 IGHV3-7P01780 117 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 BRS3P32247 399 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 RANBP1P43487 201 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 TMEM50BP56557 158 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 P2RY14Q15391 338 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 RAB11BQ15907 218 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 C2orf76Q3KRA6 126 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 TMEM30BQ3MIR4 351 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 CCDC144NLQ6NUI1 221 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 ZNF880Q6PDB4 577 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 TRAT1Q6PIZ9 186 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 OVCH2Q7RTZ1 564 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 THNSL2Q86YJ6 484 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 DTX3Q8N9I9 347 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 OR51D1Q8NGF3 324 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 OR4K15Q8NH41 348 aa11.03□□□□□ -0.64
PTCH1-217ENST00000548420 MRPL30Q8TCC3 161 aaKnown RBP11.03□□□□□ -0.64
PTCH1-217ENST00000548420 FAM3DQ96BQ1 224 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms