RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MMP28Q9H239 520 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 RANBP3Q9H6Z4 567 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-224ENST00000544990 LINC00574Q9H8X3 128 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 PLGRKTQ9HBL7 147 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 ZNF286AQ9HBT8 521 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 ETAA1Q9NY74 926 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 ZNF581Q9P0T4 197 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 RCC2Q9P258 522 aaKnown RBP5.94□□□□□ -1.46
CPSF7-224ENST00000544990 TRAPPC2LQ9UL33 140 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 TCF19Q9Y242 345 aa5.94□□□□□ -1.46
CPSF7-224ENST00000544990 TRAV39A0A0B4J263 110 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 UBE2QL1A1L167 161 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 A6NDX4 124 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 J3QR06 171 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 SLC17A2O00624 439 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 PDCD5O14737 125 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 SLC22A1O15245 554 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 SPINT2O43291 252 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 PDCD6O75340 191 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 MT-ND4P03905 459 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 CD37P11049 281 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 ARSBP15848 533 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 CALRP27797 417 aaKnown RBP5.93□□□□□ -1.46
CPSF7-224ENST00000544990 SSTR5P35346 364 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 FABP5Q01469 135 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 LTC4SQ16873 150 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM30BQ3MIR4 351 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 LDLRAD2Q5SZI1 272 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 SYT6Q5T7P8 510 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-224ENST00000544990 BAIAP2L2Q6UXY1 529 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 OR2W3Q7Z3T1 314 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 OR52M1Q8NGK5 317 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 OR4K15Q8NH41 348 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 CAPSLQ8WWF8 208 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 FCGR1BQ92637 280 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 RPEQ96AT9 228 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 AKR1E2Q96JD6 320 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 URM1Q9BTM9 101 aaKnown RBP5.93□□□□□ -1.46
CPSF7-224ENST00000544990 KCNIP1Q9NZI2 227 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 AK6Q9Y3D8 172 aaKnown RBP5.93□□□□□ -1.46
CPSF7-224ENST00000544990 V9GY05 133 aa5.93□□□□□ -1.46
CPSF7-224ENST00000544990 TRDV1A0A1B0GX56 115 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM14DPA8MWL7 114 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 LY6LH3BQJ8 138 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 C15orf65H3BRN8 121 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 CCRL2O00421 344 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 SDCBPO00560 298 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TIMM23O14925 209 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM127O75204 238 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 GYPEP15421 78 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 GALP22466 123 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 MYL9P24844 172 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 IL3RAP26951 378 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 GNG10P50151 68 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 RAB7AP51149 207 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 PROK1P58294 105 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 RPS27AP62979 156 aaKnown RBP5.92□□□□□ -1.46
CPSF7-224ENST00000544990 MADCAM1Q13477 382 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 RAB11BQ15907 218 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 SSX1Q16384 188 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 Q3ZCU0 254 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TPTE2P1Q5T6R2 138 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 UBE2UQ5VVX9 321 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 SIGIRRQ6IA17 410 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 OR10K2Q6IF99 312 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 CCBE1Q6UXH8 406 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-224ENST00000544990 C16orf82Q7Z2V1 217 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 ZNF554Q86TJ5 538 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TMEM219Q86XT9 240 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 SPARTQ8N0X7 666 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 GAPTQ8N292 157 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 ZBTB34Q8NCN2 500 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 OR10X1Q8NGY0 326 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TOMM40LQ969M1 308 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 CITED1Q99966 193 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TM2D1Q9BX74 207 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 PRSS22Q9GZN4 317 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 ZNF696Q9H7X3 374 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 PLEKHJ1Q9NW61 149 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 NDUFB11Q9NX14 153 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 PSG11Q9UQ72 335 aa5.92□□□□□ -1.46
CPSF7-224ENST00000544990 TRAV1-2A0A0B4J238 106 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 C12orf77C9JDV5 145 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 M0QZ24 198 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 CHST1O43916 411 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 PEX14O75381 377 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 IGHV3-7P01780 117 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 GAPDHP04406 335 aaKnown RBP5.91□□□□□ -1.46
CPSF7-224ENST00000544990 FAM106CPP0CH98 169 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 VSIG10L2P0DP72 767 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 RAB3BP20337 219 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 PSMB9P28065 219 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 CHATP28329 748 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 BLVRBP30043 206 aaPredicted RBP5.91□□□□□ -1.46
CPSF7-224ENST00000544990 QRFPP83859 136 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 UNC119Q13432 240 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 P2RY14Q15391 338 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 C2orf76Q3KRA6 126 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 GAGE13Q4V321 117 aa5.91□□□□□ -1.46
CPSF7-224ENST00000544990 ZNF773Q6PK81 442 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms