RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 UNC119Q13432 240 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 HES1Q14469 280 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 IZUMO1Q8IYV9 350 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 PRR18Q8N4B5 295 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 FAM89BQ8N5H3 189 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 DRAM1Q8N682 238 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 OR56B1Q8NGI3 324 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 OR56B4Q8NH76 319 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 MRPL30Q8TCC3 161 aaKnown RBP9.44□□□□□ -0.9
HDAC4-216ENST00000544989 FAM3DQ96BQ1 224 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 WNT10AQ9GZT5 417 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 CHMP1AQ9HD42 196 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-216ENST00000544989 STEAP1Q9UHE8 339 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 HSF4Q9ULV5 492 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 AK6Q9Y3D8 172 aaKnown RBP9.44□□□□□ -0.9
HDAC4-216ENST00000544989 TET2Q6N021 2002 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-216ENST00000544989 TRBV6-6A0A0A6YYG2 114 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 RCC1P18754 421 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-216ENST00000544989 CD24P25063 80 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 CD1BP29016 333 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 EBI3Q14213 229 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 P2RY14Q15391 338 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 SSX1Q16384 188 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 ABCA11PQ4W5N1 156 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 OR10K2Q6IF99 312 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 C6orf201Q7Z4U5 140 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 MOB3BQ86TA1 216 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 NDUFA11Q86Y39 141 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 TGIF2LXQ8IUE1 241 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 ZNF439Q8NDP4 499 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 OR8H1Q8NGG4 311 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 OR2T10Q8NGZ9 312 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 OR1L1Q8NH94 360 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 RTN4IP1Q8WWV3 396 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-216ENST00000544989 SULT4A1Q9BR01 284 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 LPAR5Q9H1C0 372 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 GHITMQ9H3K2 345 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 RAB22AQ9UL26 194 aa9.43□□□□□ -0.9
HDAC4-216ENST00000544989 IGHV3-43A0A0B4J1X8 118 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 A0A1W2PPE3 182 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 LANCL1O43813 399 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 YPEL1O60688 119 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 NAPSAO96009 420 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 IGKV1D-33P01593 117 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 IGKV1-33P01594 117 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 OPN1MWP04001 364 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 OPN1MW2P0DN77 364 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 OPN1MW3P0DN78 364 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 IGHV3-43DP0DP04 118 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 RAB3BP20337 219 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 PSMB9P28065 219 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 MRPS15P82914 257 aaKnown RBP9.42□□□□□ -0.9
HDAC4-216ENST00000544989 HMGN3Q15651 99 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 MORN2Q502X0 79 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 UTF1Q5T230 341 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 ZNF773Q6PK81 442 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 CENPVQ7Z7K6 275 aaPredicted RBP9.42□□□□□ -0.9
HDAC4-216ENST00000544989 SPARTQ8N0X7 666 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 OR4F17Q8NGA8 305 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 OR51D1Q8NGF3 324 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 WIPF2Q8TF74 440 aaPredicted RBP9.42□□□□□ -0.9
HDAC4-216ENST00000544989 ST6GALNAC6Q969X2 333 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 YPEL2Q96QA6 119 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 OR4F4Q96R69 305 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 GFI1Q99684 422 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 NICN1Q9BSH3 213 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 FAAP24Q9BTP7 215 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 CENPOQ9BU64 300 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 ABHD14AQ9BUJ0 271 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 C12orf4Q9NQ89 552 aa9.42□□□□□ -0.9
HDAC4-216ENST00000544989 RYR3Q15413 4870 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 METTL21EPA6NDL7 271 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 IFITM5A6NNB3 132 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 MOSP00540 346 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 RAB6AP20340 208 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 GADD45AP24522 165 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 FGF9P31371 208 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-216ENST00000544989 ARL6IP1Q15041 203 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 C2orf76Q3KRA6 126 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 KCTD21Q4G0X4 260 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 PDLIM3Q53GG5 364 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-216ENST00000544989 CT45A1Q5HYN5 189 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 FAM71F2Q6NXP2 309 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 ZNF880Q6PDB4 577 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 TPRA1Q86W33 373 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 OR2AK2Q8NG84 335 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 OR5AU1Q8NGC0 362 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 OR10V1Q8NGI7 309 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 CT45A3Q8NHU0 189 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 UBALD1Q8TB05 177 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 PTX4Q96A99 478 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 STUB1Q9UNE7 303 aa9.41□□□□□ -0.9
HDAC4-216ENST00000544989 RRP15Q9Y3B9 282 aaKnown RBP9.41□□□□□ -0.9
HDAC4-216ENST00000544989 ITGB1BP1O14713 200 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 LDLRAD4O15165 306 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 AMY1AP04745 511 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 AMY2AP04746 511 aa9.4□□□□□ -0.9
HDAC4-216ENST00000544989 VEGFCP49767 419 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms